Loxodonta africana (African savanna elephant): 100676702
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Entry
100676702 CDS
T04351
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04137
Mitophagy - animal
lav04140
Autophagy - animal
lav05014
Amyotrophic lateral sclerosis
lav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100676702 (OPTN)
04137 Mitophagy - animal
100676702 (OPTN)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100676702 (OPTN)
05022 Pathways of neurodegeneration - multiple diseases
100676702 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100676702 (OPTN)
Membrane trafficking [BR:
lav04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100676702 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
100676702 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
100676702 (OPTN)
Xenophagy
Cargo receptors
100676702 (OPTN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF8106
EDR4-like_1st
Zn_ribbon_CLPX_N
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
100676702
NCBI-ProteinID:
XP_010589027
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MSHQPLSCLTEKGDSLDESPGNGPPNLAHPNLDTFTPEELLQQMKELLIENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLIALSHENEKLKEELGKLKGKAER
SFEVPKTEPEQEMEQLKTQVIRLQAEKADLLGIVSELQLKLNSSRSSEDSFVEIRMAEGE
ANGPFKEIKNSPGPTRTDAIDKSRSAQGARNYLEFEELTVSQLLHCLREGNQKVERLELA
LKDAKERISHFEKKANDRSEIETQTEDSAGAEKEEEKGTETVGSEVEMLKHQVTTLFKEL
QEAHTKLSEAELMKKRLQEKCQALERKNTATPSELNENQELVYNNKKLELQVESMRSEIK
MEQTKTEEEKAKLATLQLTHSKLLQEHNSALNTIEELKMKESEQVDMALLQELDEKLELA
EKALASKQLQIDEMKQTIAKQEEDLETMTVLRAQMEVYCSDFHAERAAREKIHEEKEQLA
LQLAILLKENNVFEDGGSRQSLMEMQSRHGARTSDPDQQAYLVQRGAEDRNWRQQQQRNI
PIHSCPKCGEVLPDIDTLQIHVMDCII
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccaaccactcagctgcctgacagaaaaaggggacagccttgatgaaagccca
ggaaatggtccccccaatctggctcatccaaacctggacacgttcaccccagaagagctc
ctacagcagatgaaagagctccttattgagaatcatcagctgaaagaggccatgaagcta
aataatcaggctatgaagggtcggtttgaggagctttctgcctggacagagaaacagaag
gaagaacgccagttctttgagatacagagcaaagaagccaaagagcgcctaatagccttg
agtcatgaaaatgaaaaattgaaggaagaacttggaaaactaaaaggaaaagcagaaagg
tcatttgaggttcccaagacagagccagaacaagaaatggaacagctgaagacacaggtg
attcgccttcaagctgaaaaagcagatctgctgggtattgtatctgaattacaactcaag
ctgaactcaagccgttcctccgaggactcctttgttgaaattaggatggctgaaggagaa
gcaaatggaccgttcaaagaaatcaagaatagtcccggccccacaagaactgatgccatt
gacaaaagcagatctgcacaaggagccaggaattatttggaatttgaagaattaactgtg
agccaactcctgcattgtctaagagaaggaaaccagaaggtagaaagacttgaacttgca
ctcaaggatgctaaagaaagaatttcacattttgaaaagaaagcaaatgatcgttctgag
attgagacccagactgaggacagcgcaggagcagaaaaagaagaggagaaaggcacagaa
actgttggaagtgaagtggaaatgttgaaacatcaagtgacaactctgtttaaagagctt
caggaggctcatactaaactcagtgaagcagagctaatgaagaagagacttcaagaaaag
tgtcaggcccttgaaaggaaaaatactgcaaccccatcagagttgaatgaaaatcaagaa
cttgtatataataacaaaaaattagagctgcaagtggaaagcatgcgatcagaaatcaaa
atggagcaaacgaaaacagaggaagaaaaggccaaattagccactctacagttgacacac
agcaagcttcttcaagaacacaatagtgcattgaacacaattgaggaactaaaaatgaaa
gagtcagaacaagtggacatggcactgctgcaggaactagacgaaaaactggaactggca
gagaaggcactggcttccaagcagctccaaatagatgagatgaagcaaaccattgccaaa
caggaggaggacctggaaaccatgactgtcctcagggcccagatggaggtttactgttct
gattttcatgctgaaagagccgcaagagagaagattcatgaagaaaaggagcaactggca
ttgcagctggcaattttgctgaaagaaaataatgtttttgaagatggaggcagcaggcag
tccctgatggagatgcagagccgtcatggggccagaacaagcgacccagaccagcaggct
tacctcgttcaaagaggagccgaggatagaaactggcggcaacaacaacaaaggaatatt
ccaattcattcttgccccaaatgtggagaagttctgcccgacatagatacgttgcagatt
catgtcatggactgtatcatttaa
DBGET
integrated database retrieval system
