Loxodonta africana (African savanna elephant): 100676773
Help
Entry
100676773 CDS
T04351
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lav01001
]
100676773 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lav04121
]
100676773 (TRIM28)
Enzymes [BR:
lav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100676773 (TRIM28)
Protein kinases [BR:
lav01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
100676773 (TRIM28)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100676773 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
PHD_2
PHD-1st_NSD
YaaC
Motif
Other DBs
NCBI-GeneID:
100676773
NCBI-ProteinID:
XP_023399901
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MEQLAHPTPKLHTPPSFTYSLGKKSRDMAYTGPSWIPQNKGPPLRPATQVHPPGLTSRSY
RHAFAHATHFTQSILSHIPAVLRSCSAPSRPPQRTLCSSPSPVRAPLPWHTRASLRAQQQ
GDARPLDPTFCSSSDTRLGRDLLLLTATKAALPGHNPGGTQFYCGRGAGERRPEARFRHF
HGNQMRRPAALPAACLIPHLTLCAASHSHSFRIIRGGWEEVRRGRSVGRGLHRTGWSRAA
CGGGVAGDDAEQRREQGGARIWGAGRWGWNKGRGGNKALRTPSPGEEQKATLGQRPVAPP
PPPRAPARLGEWSVDGAPHPAPRLSGPRLKVCALWGSGLGSLTLLAYPILQEASLPQPAV
AFQTRGLRTRGPGPFQELLVTQRLGDISRRPKACETNISPPARSIPVLDPILPRSSPGGR
PPVRGGGEVLELLEHCGLCRERLRPEREPRLLPCLHSACNACLGPAAPAASNSSGDGGAA
GDSAVVDCPVCKQQCFYKDIVENYFMRDSGSKAATDSQDANQCCTSCEDNAPATSYCVEC
SEPLCETCVEAHQRVKYTKDHTVRSTGPAKTRDGERTVYCSVHKHEPLVLFCESCDTLTC
RDCQLNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQK
RVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFA
SWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIV
AERSGTNSTGPAPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSVDDPYSSAEPHVSGVK
RSRSGDGEVSGLMRKVPRVSLERLDLDLTADSQPPVFKVFPGNTTEDYNLIVIERGGAAA
AAGQPGTAPPGAPGAPPLPGMAIVKEEETEAAIGAPPAAAEGPETKPVLMALAEGPGSEG
PRLASPSGSTSSGLEVVAPEGASASSGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHL
DCHLPALQDVPGEEWSCSLCHVLPDLKEEDGSLNLDEADTTGVVAKLSPANQRKCERVLL
ALFCHEPCRPLHQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMF
KQFNKLTEDKADVQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLGAPELSG
GPSDGL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggagcaactggctcaccccacacccaagctgcacacacctccaagcttcacctacagt
ctggggaagaagagtcgggacatggcgtatacagggccttcctggatacctcagaacaaa
ggcccacctctgagacccgccacccaggtccatcctccgggtctgacgtcgcgttcctac
cgccacgcctttgcccatgccacgcattttactcaaagcattctctcccatattcccgcc
gtgctccggtcctgcagcgccccctcgcgtccgccgcagcgtacgctctgcagctctccg
agcccagtacgagcgcctctcccctggcacacccgggcatcgttgcgggctcagcagcag
ggggatgcccgcccgctcgaccccaccttctgctcctcctcagacaccaggctgggccgt
gacctcctcctcctcaccgccaccaaggccgcacttccgggccacaacccgggcggaaca
caattctactgcggccggggcgctggggaacgccggcccgaagcacgtttccggcatttc
catggaaatcagatgcgccgaccggcagcacttccggctgcctgcctgatcccccacctc
accctgtgcgccgccagccattcacattcgttccgaattatcagaggtggctgggaggag
gtgagaaggggccggtcagtggggcgtggccttcaccgcaccggctggagccgggcagcc
tgcggagggggcgtggcgggcgatgacgcagagcagaggcgggagcagggcggggcccga
atttggggggccgggcgctggggctggaacaaaggcaggggcgggaacaaagctctgcgg
accccgagccccggagaggaacaaaaggcaaccttgggccagcggccagtcgcccctccg
ccaccgccacgtgcgcccgcacggcttggggagtggagtgtagatggcgccccccacccc
gccccaagactgtccggcccccgccttaaagtgtgcgcactctggggctccggcctgggc
tcgctgaccctgctggcctaccccatcctccaggaagcctccctcccccaacctgccgtc
gcatttcagacgcgaggcctcaggacccgagggcccgggcccttccaggagctattggtg
acgcagaggcttggcgatatctctcgccggccgaaagcttgtgagaccaacatctctccc
cccgcgcgtagtatccctgtacttgatccgatactgcctcgcagtagccctgggggtcgt
ccaccggttcgaggcggtggtgaggtgctggagctgctggagcattgcggcctgtgtcga
gagcgcctgcggcccgagcgggagccgcgcctgctcccctgcctgcactcggcctgcaac
gcctgcctcgggcctgccgcacccgccgcgtccaatagctcaggagacggcggcgcggcg
ggggacagcgcggtggtggattgtcccgtgtgcaagcagcagtgcttctacaaagatatc
gtggaaaactattttatgcgcgacagtggtagcaaggctgccaccgattcccaggatgct
aatcagtgctgcaccagctgtgaggataatgcacccgccaccagctactgcgtggaatgc
tccgaaccgctttgtgagacatgtgtggaggcacaccagcgggtgaagtacaccaaggac
cacactgtgcgatccactgggccggctaagacgcgggatggcgagcgcactgtgtactgc
agcgtacacaagcacgagccccttgtgctgttttgcgagagctgtgacaccctcacctgt
cgggactgccagctcaatgcccacaaggaccatcagtaccagtttctggaggatgcagtg
aggaaccagcgcaagctcctggcctcgttggtgaagcgcctgggggacaagcatgccacg
ctgcagaagagtaccaaggaggttcgcagctcaatccgccaggtgtcagacgtgcagaag
cgtgtgcaggtggatgttaagatggccattctgcagataatgaaggagctgaataagcgc
ggtcgcgtgttggtcaatgatgcccagaaggtgaccgaggggcagcaggagcggctggag
cggcagcactggaccatgaccaagatccagaagcaccaggagcatatcctgcgctttgcc
tcctgggccctggagagtgacaacaacacggctttgctgctgtccaagaagctgatctac
ttccagctgcaccgtgctctcaagatgatcgtggaccccgtggagccacacggcgagatg
aaattccagtgggacctgaacgcctggaccaagagtgctgaggccttcggcaagatcgtg
gcagagcgctcgggcaccaactccacaggccctgcacccatggcccctccgcgggcccct
ggcccactgagcaagcagggctcgggcagcagccagcccatggaggtacaggaaggctac
ggctttgggtcagtagatgacccctactccagtgcggagcctcacgtatcgggtgtgaag
cggtctcgctctggtgacggtgaggtgagcggcctcatgcgcaaggtgccgcgggtgagc
ctcgagcgcctggacttggacctcacagccgacagccagccacccgtattcaaggtgttt
ccaggcaacaccacagaggactacaatctcattgtcatcgagcgtggtggtgctgccgcg
gctgccggtcagccagggactgcaccccctggagcccctggagctccgcccctgcctggc
atggccattgtcaaggaggaagagacagaggcagcaattggagctccgcctgctgctgct
gaaggccccgagaccaagcccgtgctgatggccctggcagagggccctggttctgagggc
ccccgcctggcctcacccagtggtagcaccagctcgggtctggaggtggtggcccctgaa
ggtgcctcagcctcatctggtggcccaggtgccctggacgacagcgccaccatctgtcgc
gtctgccagaagccaggtgacctggtcatgtgcaaccagtgcgaattttgcttccacctg
gactgccacctgccggctctgcaggatgtgccaggggaagagtggagctgttcactttgc
catgtgctccctgacctgaaggaggaggacgggagcctcaacctggatgaggccgacaca
actggtgtggtggccaagctttcaccggccaaccagcggaagtgtgagcgtgtcctgctg
gccctgttctgccatgagccgtgccggcccctgcaccagctggccactgactccaccttc
tccttggaccagcctgggggcaccctggacctgacactgatccgtgcccgtctccaggag
aaattatcacctccctacagttccccccaggaatttgcccaggatgtggggcgtatgttc
aagcagttcaacaagctgacagaggacaaggcggacgtgcagtccatcattggtctgcaa
cgcttttttgagacgcgcatgaatgaagcttttggcgacaccaagttctcagcagtgctg
gtcgagcctccaccactgagcctacctggtgctggtctgggggccccagagctgtctggt
ggccccagtgatggcctctga
DBGET
integrated database retrieval system
