Loxodonta africana (African savanna elephant): 100677211
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Entry
100677211 CDS
T04351
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04613
Neutrophil extracellular trap formation
lav05014
Amyotrophic lateral sclerosis
lav05034
Alcoholism
lav05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100677211 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100677211 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100677211 (HDAC6)
09165 Substance dependence
05034 Alcoholism
100677211 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lav01009
]
100677211 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100677211 (HDAC6)
04131 Membrane trafficking [BR:
lav04131
]
100677211 (HDAC6)
03036 Chromosome and associated proteins [BR:
lav03036
]
100677211 (HDAC6)
Enzymes [BR:
lav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100677211 (HDAC6)
Protein phosphatases and associated proteins [BR:
lav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100677211 (HDAC6)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100677211 (HDAC6)
Membrane trafficking [BR:
lav04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100677211 (HDAC6)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100677211 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100677211
NCBI-ProteinID:
XP_010596001
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MTSTGQDSTTNRQRRSRHNPHSPSHNSSVISKRGVKKGAVPRSSPSLAEVKKKGRMKKLS
QAAEQDLIMGLQELDLNLEPKALSGTGLVFEEQLNEFHCLWDDSFPECSERLHAIKEQLT
QEGLLDRCISFQARSAKKEELMLVHSLEYIDLMETTQYMNEAELRILANTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGAKVRNGMAVIRPPGHHAQHNLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEHGQFWPHLKASNWSATGFGRG
QGYNINVPWNQVGMRDADYIAAFLRILLPVALEFQPQLVLVAAGYDALQGDPKGKMAATP
AGFAQLTHMLMGLAGGKLILSLEGGYNYRSLAEGVSASLHTLLGDPCPMLESPGAPCLSA
RTSISCTLVALKPFWEVLMQSAETLEEDCVEKDKEEGPWEPPVPQIMAWPMLCARTGLIY
DRRMMNHYNLWDNHHPEMPQRISRIMCHLEGLGLTERCLTLPARPATDAELLTCHRWGWN
HLTAHQCSSHASSAEYIARLRATENMKTRELHREGANFDSIYICPSTFTCAQLATGAVCR
LVEAVLAGEVLNGTAVVRPPGHHAEWDAACGFCFFNSVAVAARHAQAISGHALRILIVDW
DIHHGNGTQHIFEDDPSVLYMSLHRYDHGTFFPMGNEGASSQIGQAPGVGFTVNVAWNGP
RMGDPDYLAAWHRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVSPEGYAHLTHLLMG
LANGRIILILEGGYNLTSISESMAACTRTLLGDPPPLLGPLRPPLSGALASISETVHVHR
RYWRSLRIRKVEDKEEEPSNSGLVTKKEPQPANPGSAKGMARPEENILEAGMGKATSASP
VEESIPGQAKSEIATVELAKDKSLEVATGGAMLDQTTSEGPVGHTKLASCTDSQTPPSSP
VQGTTPYIFPRNLIESLRTLELSNKTQKAPDSQTPEEKLLGEAAGGQDLDDSKLMGFGDT
DEATFYAVTPLPWCPHLTAVCPIPAAGLDVTQPCQDCGSLQENWVCLSCYQVCCGRYINA
HMIQHHEDLGHPLVLSFVDLSTWCYHCQAYVHHQALLDVKNLAHQNKFGEDMPRPH
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaagattccaccacaaacagacagcgaaggagtagacacaacccc
cactcaccctcccataactccagcgtcatctcgaagcgtggtgttaaaaagggtgctgta
ccccgctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctaatcatggggctgcaagagctggatctgaacctggagccc
aaggcactgtctggcacaggcttggtgttcgaagagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaatgctctgagcggctccatgccatcaaggagcagctgacc
caggagggcctcttagatcgctgtatctccttccaggctcggtcagccaaaaaggaggag
ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat
gaggcggaactccgcatcctggcaaacacctatgactcagtctacctgcatccaaactca
tacacctgtgcctgcctagcctcaggctctgtcctcagactggtggatgcagttctgggg
gccaaagtccggaatggcatggctgtcatcaggcctcctggacaccacgcccagcacaat
cttatggatgggtattgcatgttcaaccatgtggccgtggctgcccgctacgctcagcag
aagcatgatattcagagggtccttattgtggattgggatgtgcaccatggtcaaggaaca
cagttcacctttgaccaggaccccagcgtcctgtatttctccatccaccgctatgagcac
ggccagttctggccccaccttaaggcctctaactggtccgccacaggcttcggccgaggt
cagggatacaacatcaatgtgccttggaaccaggtggggatgcgggatgccgactacatt
gctgcgttcctgcgcatcctgctgccagttgcccttgagttccagccacagctggtcctg
gtggctgctggatatgatgccctccaaggggaccccaagggcaagatggctgccactcca
gcagggttcgcgcagctgacccacatgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaactaccgctccctggctgagggcgtcagtgcctcgctccac
acccttctgggagacccttgtcccatgctggagtcccctggtgccccctgcttgagtgcc
cgaacttcgatttcctgcactctggtagccctcaagcccttctgggaggtccttatgcaa
tctgctgagaccctcgaggaggactgcgtggagaaggacaaggaggaggggccgtgggag
ccccctgtgccccaaatcatggcctggccaatgctgtgtgctcgcacagggctgatctat
gaccggcgtatgatgaatcactacaacttatgggacaaccaccaccccgagatgccccag
cgcatctcgcgaattatgtgccatctggaggggctgggcctcactgagcgctgcctcacc
ctgcctgcacgccccgccacagatgccgagctgctcacctgccacaggtggggctggaac
cacctcactgcccaccagtgctcgtctcatgcctccagtgctgagtacatagctcgtctg
cgggccacggagaacatgaagacccgggaactgcaccgtgagggcgccaactttgactcc
atctacatctgccccagcaccttcacctgtgcacagctcgccactggcgctgtgtgccgc
ctagtggaggctgtgcttgctggagaggtactgaatggtactgctgtggtgcgcccacca
ggacaccacgcagagtgggatgctgcttgtggtttctgcttttttaactctgtggctgtg
gctgctcgccatgcccaggccatcagtgggcatgccctgcggatcctgatcgtggattgg
gacatccatcatggtaatggaactcagcacatatttgaggatgaccccagtgtgctctac
atgtcacttcaccgctatgatcatggcaccttcttccccatggggaatgagggtgccagc
agccagattggccaggcccccggtgtaggcttcactgtcaacgtggcctggaatgggccc
cgcatgggtgaccccgactacctggctgcctggcatcgtctggtacttcccattgcctac
gagtttaacccagaactggtgctggtctcagctggctttgacgccgcacagggagacccc
ttggggggttgccaggtgtcacctgaaggctacgcccacctcacccacctgctgatgggc
cttgccaacggccgcattatcctaatcctagagggtggctataacctgacatccatctcg
gagtccatggctgcctgcacccgcaccctccttggggacccaccacccctgctgggccct
ctgaggcccccgctatcaggggcccttgcctcgatctcagagactgtccacgtccatcgc
agatactggcgtagcttgcggatcagaaaggtggaggacaaggaggaggaaccctccaat
tctgggctggtcaccaagaaggagcctcaaccagccaatcctgggtcagccaaggggatg
gccaggccagaagaaaacattctggaagcaggcatggggaaggctacctcagcatcacct
gtggaggagtccattccaggccaggctaagtcagagatagccacggtggagctcgctaaa
gacaagtccttggaggtagccactggtggggccatgctggaccagaccacctcagagggg
cctgtggggcacaccaagctagcttcatgcactgacagccagacccccccatcctcacct
gtgcagggaaccaccccttacatattccccagaaacttgattgagagtctcaggaccttg
gaactaagcaataagactcagaaggccccagattctcagaccccagaagagaagctacta
ggagaggcagctggaggtcaggacttggatgattccaagctgatgggctttggtgacact
gacgaggccaccttttatgctgtgacaccactgccctggtgtccccatttgacggcagtc
tgccccatacctgcagcaggcctggatgtgacacaaccctgtcaggactgcggatccctc
caggagaattgggtgtgcctgtcttgctatcaggtctgctgcggtcgttacatcaatgcc
catatgatccaacaccatgaagacttgggacatccactagttctcagcttcgtcgacctg
tctacctggtgttaccactgtcaggcatatgtccaccaccaggctctcctagatgtgaag
aatctcgcccaccaaaacaagttcggggaggacatgcctcgaccacactaa
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integrated database retrieval system
