Loxodonta africana (African savanna elephant): 100677252
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Entry
100677252 CDS
T04351
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03022
Basal transcription factors
lav05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100677252 (TAF4B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100677252 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100677252 (TAF4B)
03036 Chromosome and associated proteins [BR:
lav03036
]
100677252 (TAF4B)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100677252 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
100677252 (TAF4B)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100677252 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
100677252
NCBI-ProteinID:
XP_003406395
UniProt:
G3SMQ6
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MPAGLSEPAGAAPPAGVNVSGTVTMAPTGALPVRMENAPVALGAATKASVTVCMGSSASQ
PLRKAAPVGTLVTKVASVSAVPQVSGGPRLPAPQIVAAAKAPNTTVLLPANIQLPPGTVV
IKSNSGQLMLVSPQQALTRADTTSNVISRPAVPTNTQSIKTCLMPNSSSQLIKKVAMVPV
KKLAQTGTTVVTTVPKPSSVQSVPVPNNVVTVTPVKPLNTVPTLEASSFGVSPMPSSEPN
LKTESSAVAQTNLSPMMLENVKKCKNFLAMLIKLACGGSQSPEMGQNVQGLVEQLLDAKI
EAEEFTRKLYVELKSSPQPHLVPFLKKSVIALRQLIPNSQSFIQQCVQQTSSEAVIATCT
TTVTSSPVVTTASSVQSEKTVTVSGETAPRTVSVHIENPLAGPDGANTGVVTLHPVGPAA
IPGGTTAGTVLLQTSKPLVTSVPNTVTTVSLQPEKPVVSGAAVSLALPSVTFGETSAATI
CLPSMKPVVTFSGTTADKPVVDAPVQIRLAQPNSILSQPPGIPQAVKVKQLVVQQPSGGI
TKQVTTLSHSSALTIQKSGQKKMPVDTVISTSQFSPASVLKQITLPGNKVLSLQVSPLQK
TKIKENGTTSFRDEDDINDVTSMAGVNLNEEDACILATNSELVGTLIRSCKDEPFLFIGA
LQKRILDIGKKHDITELNSDAVNLISCATQERLRGLLEKLTTIAQHRMTTYKTSENYILS
SDTRSQLKFLEKLDQLEKERKDLEEREMLFKAAKSRSNKEDPEQLRLKQKAKELQQLELA
QIQHRDANLTALAAIGPRKKRPLESGNEGIKDNLLASGTPSLTATKQLLRPRITRVCLRD
LIFCMEQEREMKYSRALYLALLK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgggcctctcagagccggccggtgccgctcccccggctggtgtcaacgtctcc
gggaccgtgaccatggcccctaccggggctctgccggtccggatggagaacgcgccggtg
gccctgggcgccgcgaccaaggcttctgtcactgtctgcatggggtcctcggcgtcccag
cccctgcggaaggcggcccctgtggggaccctggtgaccaaagtggcttctgtcagtgct
gttcctcaagtcagcggcggccctaggctgcccgcccctcagatagtcgccgccgctaaa
gcccccaacacaacagtcttgttgcctgctaatattcagcttcctccaggaacagttgtg
atcaaaagtaacagcggtcagttgatgttagtatcccctcagcaagctttaacaagagcc
gatactactagtaacgtaatttcaaggccagcagtaccaacgaatactcaatcaatcaaa
acctgtctgatgccgaattctagctcacagttaatcaagaaagtggcaatggtacctgtt
aaaaaattggcacaaactggaactacagtagtaaccactgttccgaagccttcctcagta
caatctgtgcctgtgccaaacaatgttgtcacagttactcctgtaaagccgttgaatact
gtacctaccctggaggcttcaagttttggagtatcacccatgccctccagtgagcccaat
ctgaaaaccgagagctcagcagtcgctcagactaatctttccccgatgatgctagaaaat
gtgaagaaatgtaagaacttccttgcaatgttaataaaactggcatgtggtggatcacag
tccccagaaatggggcagaatgtgcagggattggtggaacaacttctggatgcaaaaatt
gaagcagaagaatttactaggaaactgtatgttgaactcaagtcttcacctcaacctcac
ctagttccttttcttaagaaaagtgtgattgccttacgacaacttatacctaactctcag
agctttattcagcagtgtgttcagcagacttctagtgaggcagtcattgctacttgtacc
acaacagtaacttcttctcctgtggtgacaacagcttcctcagtccagtctgaaaagact
gttactgtttctggagaaacagcccctagaactgtgtcagtacacattgagaatccactt
gctggtccagacggagcaaacactggagttgtgacacttcatcctgtgggtccagctgct
ataccaggaggaacaacagctggaactgttttgcttcagacttcaaaaccacttgtgact
tctgtaccaaatacagttacaacagtctcacttcaacctgaaaaaccagttgtttctgga
gcagcagtatcactggcccttccatcggtgacttttggagaaacttcagctgcaactatt
tgtcttccttctatgaaacctgttgttactttttctgggaccacagctgacaagcctgtg
gttgatgctccagtccagatcagacttgcacagccaaactccatcctttcacaaccacct
ggtattccacaggcagttaaagtcaaacaactagtagttcaacagccttcaggaggcatc
acaaaacaagtgactacactttcccattcctcagcattgaccattcagaaatctggacaa
aagaaaatgccagtcgacactgtaatatcgaccagtcagttttctccagcttccgttcta
aaacaaattaccctaccaggaaataaagttctgtcacttcaagtatcgcctctgcagaaa
actaaaataaaagagaatggaacaacatcgttcagagatgaagatgacatcaatgatgtg
acttccatggcaggggtcaacctcaatgaagaagatgcctgcatcttagcaacaaactct
gagttggttggcacgctcattcgatcatgtaaagatgaaccatttcttttcattggagct
ctacaaaagagaattttagacattggtaaaaagcatgacattacggagcttaactctgat
gctgtgaacttgatctcctgtgcaacccaggagcgattacgaggccttctagaaaaactg
actacaattgctcagcatcgaatgaccacttacaagacaagtgaaaattacatcctgtct
agtgacaccaggtcacagctcaaatttcttgaaaaactggatcaattggagaaggagaga
aaggatttagaagaaagagaaatgttatttaaagcagccaagagtcgttccaataaagaa
gatccagaacagctgagattaaagcagaaagccaaagagttacaacagttggagctcgca
cagatacagcatagagatgccaatcttacagcccttgcagctattggaccgaggaagaag
agaccattagaatctggaaatgagggcataaaagacaaccttcttgcttctgggacgccc
agcctgacagccaccaaacagttgcttcgtccaagaatcacaagagtctgcctcagggac
ttgatattctgtatggagcaggaaagggagatgaaatattcccgagctctgtacctggcc
cttctgaagtga
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