KEGG   Loxodonta africana (African savanna elephant): 100677409
Entry
100677409         CDS       T04351                                 
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha
  KO
K05468  lymphotoxin alpha (TNF superfamily, member 1)
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04060  Cytokine-cytokine receptor interaction
lav04061  Viral protein interaction with cytokine and cytokine receptor
lav04064  NF-kappa B signaling pathway
lav04668  TNF signaling pathway
lav04940  Type I diabetes mellitus
lav05166  Human T-cell leukemia virus 1 infection
lav05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100677409 (LTA)
   04668 TNF signaling pathway
    100677409 (LTA)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100677409 (LTA)
   04061 Viral protein interaction with cytokine and cytokine receptor
    100677409 (LTA)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100677409 (LTA)
   05168 Herpes simplex virus 1 infection
    100677409 (LTA)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100677409 (LTA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:lav04052]
    100677409 (LTA)
Cytokines and neuropeptides [BR:lav04052]
 Cytokines
  Tumor necrosis fators
   100677409 (LTA)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 100677409
NCBI-ProteinID: XP_003422262
UniProt: G3T0Q4
LinkDB
Position
Unknown
AA seq 205 aa
MTRPGHLYLLRVHGNPLLLLLLGLLLALPSETQGLPGVGLSASTARTAQQHPQKHFIPGT
LKPAAHLVGDPSAQTSLRWRANTDHAFLRHGFSLSNNSLLVPTSGLYFVYTQVVFSGEGC
SPKATTTPLYLAHEVQLFSSQYPSHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQ
LSTHTVGSSHLLLSPSSVFFGAFAL
NT seq 618 nt   +upstreamnt  +downstreamnt
atgacacgacctgggcacctctacctcctgagggtgcatggcaaccccctcctcctcctc
cttctggggctgctgctggccctgccgtctgaaacccagggcctccctggggttggcctc
tcagcttccactgctcggactgcccagcagcacccccagaagcatttcattccaggcacc
ctcaaacctgctgctcacctcgttggagaccccagcgcccagacctcgctgcgctggaga
gcaaacacagatcacgccttcctccgccatggcttctctttgagcaacaattcccttctg
gtccccaccagtggcctctactttgtctacacccaggtggtcttctccggggaaggctgc
tcccccaaggccaccaccactcctctctacctggctcatgaggtccagctcttctcctcc
cagtacccctcccatgtgcctctcctcagtgcccagaagtctgtgtgcccaggtccacag
ggaccttgggtacgctcagtataccagggggctgtgttcctgctaacccggggagaccag
ctatccactcacacagttggcagctcccacctactccttagccccagtagtgttttcttt
ggagccttcgctctgtag

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