Loxodonta africana (African savanna elephant): 100677596
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Entry
100677596 CDS
T04351
Symbol
L1CAM
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1
KO
K06550
L1 cell adhesion molecule
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04360
Axon guidance
lav04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100677596 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100677596 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100677596 (L1CAM)
04090 CD molecules [BR:
lav04090
]
100677596 (L1CAM)
04091 Lectins [BR:
lav04091
]
100677596 (L1CAM)
Cell adhesion molecules [BR:
lav04515
]
Immunoglobulin superfamily
L1 family
100677596 (L1CAM)
CD molecules [BR:
lav04090
]
Proteins
100677596 (L1CAM)
Lectins [BR:
lav04091
]
I-type lectins (Siglecs)
100677596 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
C2-set_3
Pur_ac_phosph_N
Fndc10
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
100677596
NCBI-ProteinID:
XP_010599398
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MAVALRYVWLLLLCSPCLLIQIPEELMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEV
QFRWTRDGIHFKPEEELGVTVHQAAHSGSFTFTGNNNFAQRFQGTYRCFASNKLGTAMSH
EIQLVAEGAPKWSKETVKPVEVEEGEPVVLPCHPPLSAEPPRIYWMNSKILHIKQDERVT
MGQDGNLYFANVLTTDNHSDYICHAHFLGARTIIQKEPIDLRVKATNSMIDRKPRLLFPT
NSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLVNVGEED
DGEYRCLAENPLGTARHAYYVTVEAAPYWLHKPQSQLYGPGETARLDCQVQGRPQPEVTW
RINGIPLTELSEDQKYRTQQGDALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLP
TKILTPDNQTYLAVEGSTAYLLFKAFGAPVPSIQWLDEEGATVLQDERFFPYANGTLGIR
DLQANDTARYFCQATNDQNNVTIVANLQVKDATRITQGPQSAIEKKGSRVTFTCQASFDP
SLKHSITWRRDGRDLQELGDSDKYFIEDSRLIIQSLDYSDQGNYSCVASTKLDVVESRAQ
LLVVGSPGPVPQLELSDRHLLKQCQVRLSWSPAEDHNAPIEKYDIEFEDKKMEPEKWYSL
GKVPGNQTSTTLKLSPYIHYTFRVTAINKYGPGEPSPASETVLTPEAAPEKNPVDVRGEG
NETNNMVITWKPLKWMDWNAPQVQYRVQWRPQGVRGAAWQEQILSKPFLVVTNTSTFVPY
EIRVQAVNSQGKGPEPHVTIGYSGEDFPQASPQLDGVKILNSSAVLVKWWPVDPAQVKGH
LRGYNVTYWWEGSQRKHSKRHVHRGHVVVPANTTSAILSGLRPYSSYHLEVQAFNGRGAG
PASEITFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDEGSKE
QLSFDLRNPELRMHNLTNLDPHLRYRFQLQATTKKGPGEAIVREGGTMALSGDPDFGNIS
ATAGENYSIVSWXPXEGQCNFRFHILSGPCGEGKRGXXLPSRWGQRNXPPRAQGNSSSEG
GLRAWRWGQSCVCSPPPGRVRLPPAGFATEGWFIGCVSAVILLLLILLILCFIKRSKGGK
YSVKDKEDTQVDSEARPMKDETFGEYSDNEEKAFGSSQPSLNGDIKPLGSDDSLADYGGS
VDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVTLE
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcgctgcggtacgtgtggcttctccttctgtgcagtccctgcttgctcatc
cagatccccgaggaattgatggagccacccgtcatcacagagcagtcaccccggcgcctg
gttgtcttccccaccgatgacatcagcctcaagtgtgaggccagtggcaaacccgaagta
caatttcgctggacacgggatggtattcacttcaaacctgaggaggagctaggcgtgact
gtgcaccaggcggcccactcaggctccttcaccttcacgggcaacaacaacttcgctcag
agattccagggcacctaccgctgctttgccagcaacaagctgggcactgccatgtcccac
gagatccagctcgtggctgagggtgcccccaagtggtcaaaggagacggtgaagccggtg
gaggtagaggaaggggagccggtggtattgccctgccacccgcccctcagtgctgagcct
cctcgcatctactggatgaacagcaagattctgcacatcaagcaggacgagcgggtgaca
atgggtcaggacgggaacctgtactttgctaatgtgctcactacggacaaccactcggat
tacatctgccatgcccatttcctgggcgcccgcaccatcattcagaaggaacccattgac
ctccgggtcaaggccaccaacagcatgattgacaggaagccacgcctgctcttccctacc
aactccagcagccacctggtggccttgcagggacagcccctggtcctggagtgcattgct
gagggcttccctacgcccaccatcaagtggcttcgcccaagtggccccatgccagctgac
cgcgtgacttaccagaaccacaacaagacgctgcagctggtgaatgtgggcgaggaggat
gacggcgagtaccgctgcctggctgagaacccgctgggcactgcccggcatgcctactat
gtcactgtggaggctgccccatactggctgcacaagccccagagccaattgtacgggccg
ggagagactgcacgcctcgactgccaggtccaaggcaggccccaacccgaggtcacctgg
agaatcaacgggatccctttgacggagctgagcgaggaccagaagtacaggacccagcaa
ggagacgccctgatcctgagcaatgtgcagcccagtgacaccatggtgacccagtgtgag
gcccgcaatcggcatggactcctgctggccaatgcctacatctatgttgtccagctgccc
accaaaatcttgactccagacaaccagacgtacctggccgtcgagggcagcacagcctac
cttctgttcaaggcctttggggcccccgtgcccagcatccagtggctcgacgaggagggg
gcaacagtacttcaggatgagcgcttcttcccctacgccaatgggaccctgggcatccgg
gacctccaggccaatgacaccgcacgctatttctgccaggccaccaatgaccaaaacaat
gtgaccattgtggctaacctgcaggtcaaagatgccactcggatcacgcaggggccccag
agtgcaattgagaagaagggttcgagggtgacgttcacatgccaggcttcctttgacccc
tccttgaagcatagcatcacctggcgcagggatggccgtgacctccaggagcttggagac
agtgacaagtatttcatcgaggacagccgcctgatcatccagagcctggactacagcgac
cagggcaactacagctgcgtggccagcaccaagctagacgtggtggagagcagggcccag
ctcctggtggtggggagccctgggccagtgccccagctggaactgtccgatcgccacctg
ttgaagcagtgccaggtgcgtctatcctggagccccgccgaggaccacaacgctcccatt
gagaagtatgacattgaatttgaagacaagaaaatggagccggagaaatggtacagcctg
ggcaaggtgccagggaaccagacttctaccacccttaagctgtcaccctacatccactac
acctttagggtcactgccatcaacaagtatggccctggggagcccagcccggcctccgag
actgtgctaacacctgaggcagccccagagaagaaccccgtggatgtgaggggggaaggg
aatgagaccaacaacatggtcatcacgtggaagccactcaagtggatggactggaatgcc
ccccaggttcagtaccgggtacagtggcgccctcaaggggtgcggggggcagcctggcag
gagcagattttgagcaagccgttcctggtggtgaccaacacgtccaccttcgtgccctac
gagatcagagtccaggctgtcaacagccagggcaagggccctgagccccacgttaccatt
ggctactctggggaggacttcccccaggccagcccccagctagatggtgtcaagatcctc
aactcgagtgctgtgctggtcaagtggtggcctgtggacccagcccaggtcaaaggccac
ctccggggatacaacgtgacgtactggtgggagggcagccagaggaagcacagcaagagg
catgtgcacagaggccacgtggtggtgcctgccaacaccaccagtgccatcctcagtggc
ctgcggccctacagctcctaccacctggaggtgcaggccttcaacggacggggtgcaggg
cccgccagcgagatcaccttcagcacaccagagggagtgcctggccaccctgaggcgctg
catctggagtgccagtcagacaccagcctgctgctgcactggcagcccccgctcagccac
aacggcgtgctcaccggctacgtgctctcctaccaccccttggatgagggcagcaaggag
cagctgtcgtttgaccttcggaacccggagcttcggatgcacaaccttaccaacctcgac
ccccaccttcggtaccgcttccagctgcaggccaccacgaagaagggcccgggtgaggcc
atcgtgcgggaaggaggcaccatggccttgtccggtgacccggattttggcaacatctca
gccacagcaggcgagaactacagcatcgtctcctggngtccttaggagggccagtgcaac
tttcggttccacattctgtcaggcccttgtggtgagggcaagagggggnnnnccctgccc
agccgctggggacagaggaactagcccccaagggcgcaggggaacagcagctccgaggga
ggccttcgagcatggcggtggggacagagctgtgtctgctccccgcccccaggacgggtg
aggctgcctccagcgggctttgccactgagggctggttcatcggctgtgtcagcgccgtt
atcctcctgctgctgattctgctcatcctctgcttcatcaagcgcagcaagggtggcaag
tactcagtaaaggacaaggaggatacccaggtggactcagaggcccggccgatgaaagat
gagacttttggcgagtacagcgacaacgaggagaaggcctttggcagcagccagccatcc
ctcaatggggacatcaagcccctgggcagtgacgacagcctggctgattatgggggcagt
gtggacgtccagttcaatgaggacggctcctttatcggccagtacagcggcaagaaggag
aaggaggcagcaggtggcaatgacagctctggggccacctcccccatcaaccctgcagtg
accctggagtag
DBGET
integrated database retrieval system
