Novilysobacter avium: INQ42_00735
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Entry
INQ42_00735 CDS
T08144
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lavi
Novilysobacter avium
Pathway
lavi03030
DNA replication
lavi03410
Base excision repair
lavi03420
Nucleotide excision repair
lavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
INQ42_00735 (polA)
03410 Base excision repair
INQ42_00735 (polA)
03420 Nucleotide excision repair
INQ42_00735 (polA)
03440 Homologous recombination
INQ42_00735 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lavi03032
]
INQ42_00735 (polA)
03400 DNA repair and recombination proteins [BR:
lavi03400
]
INQ42_00735 (polA)
Enzymes [BR:
lavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
INQ42_00735 (polA)
DNA replication proteins [BR:
lavi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
INQ42_00735 (polA)
DNA repair and recombination proteins [BR:
lavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
INQ42_00735 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
INQ42_00735 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QOW22190
LinkDB
All DBs
Position
161307..164117
Genome browser
AA seq
936 aa
AA seq
DB search
MKRLVLIDGSSYLYRAFHALPPLTNADGEPTGALFGVVNMLRATLKENPDYIAFVIDAPG
KTFRDDLDPEYKANRPPMPDDLRPQVQPMCDIVHALGIDIIRIDGVEADDVIGTLAVQAA
DAGIDVTISTSDKDFAQLVRSGQDDNGAPRAGIALVNTMSGSRMDSDAAVIEKHGVRADQ
IVDYLALMGDKIDNIPGVDKCGPKTAAKWLAEHGTLDGVIANADSIKGKIGENLRAALHR
LPLNRTLTTIKLDVDVGLSPTELVLREQHVEELRGLYARYGFKQALRDLGGDPGDAGDGR
GDAATDAGSVRNTAAGYARNNTAVSEAPDPALSAPGEYECVDTRAKLDAWIARLQDADEF
AFDTETDSLDAMRANLVGLSFAVETGRACYIPLGHDYPGAPAQLDRAEVLDALRPLLTDP
GKRKIGQHGKYEMHVMRRHGVPIGGYADDTMLQSFVLNATATRHDMDSLALRYLGYETTK
YTDIAGKGAKQITFNQVAVDDAVNYAAEDADITLRLHRVLSAKLAEEPALEKVYREIEMP
LVPVLERIEANGVLVDADELRKQSADLGKRMLEAQQKATELAGRSFNLDSPKQVCALLFE
ELKLPAMVKTPKGQPSANEEALEAIADLHELPRVILDYRSLAKLRGTYTDKLPQMINPDT
GRLHTSYHQAGAATGRLASSDPNLQNIPIRTVDGRHIRTAFVAPPGRRIVACDYSQIELR
IMAHLSGDEGLLRAFAAGADIHKATAAEVFGKTLETVSSDDRRAAKAINFGLMYGMSAFG
LAKQLGVSRGDAQDYIGLYFARYPGVREFMDRTREQARERGYVETVFGRRLYLDNIHARN
QGLRAGAERAAINAPMQGTAADIIKRAMIEIHSWLADHAGRALMILQVHDELVFEVDADF
VDTLLEEVVARMVGAAQLRVPLLVESGVGANWDEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagactcgttctgatcgacggttccagctacctctaccgcgccttccacgcgctg
ccgccactgaccaacgccgacggcgagccgaccggcgcgctgttcggggtggtcaacatg
ctgcgcgccaccttgaaggaaaacccggactacatcgcgttcgtgatcgatgcccccggc
aagaccttccgcgacgacctggaccccgagtacaaggccaaccgcccgccgatgcccgat
gacctgcggccgcaggtgcagccgatgtgcgacatcgtgcacgcactgggtatcgacatc
atccgcatcgacggcgtcgaggccgatgacgtgatcgggacgctcgcggtgcaggcggcc
gatgccggcatcgacgtgaccatctccaccagcgacaaggacttcgcccagctggtgcgc
agtggccaggatgacaacggggcgccgcgcgcgggtatcgcgctggtcaacaccatgagc
ggcagccgcatggacagcgacgcggcggtgatcgaaaagcacggcgtgcgcgcggaccag
atcgtcgattacctggcgctgatgggcgacaagatcgacaacatccccggcgtggacaag
tgcggcccgaaaaccgcggccaaatggctggccgagcacggcaccctggatggcgtgatc
gccaacgccgacagcatcaagggcaagatcggcgagaacctgcgcgccgcgctgcaccgc
ctgccgctcaaccgcaccctgaccacgatcaagctggatgtcgacgtgggtctcagcccc
accgaactggtcctgcgcgagcagcacgtggaggagctgcgcggcctgtacgcgcgctat
ggcttcaagcaggccctgcgtgacctgggcggggatcccggggatgccggcgatggccgg
ggcgatgcggcgaccgatgccggcagcgtgcgcaacaccgccgccggctacgcgcgcaac
aacacggccgtgtccgaggcgcctgatcccgcgctgtccgcccccggcgagtacgagtgc
gtggacacccgcgcaaagctcgatgcgtggattgcccgcctgcaggacgccgacgagttc
gcgttcgacaccgagaccgactcgctcgacgccatgcgcgccaatctggtgggcctgagc
ttcgcggtagaaaccgggcgcgcctgctacatcccgctgggtcatgactacccgggcgca
ccggcgcagctggaccgcgccgaggtgctcgacgccctgcgcccgctgctgaccgatccg
ggcaagcgcaagatcggccagcacggcaagtacgagatgcacgtcatgcgtcggcacggc
gtaccgatcggcggctacgccgacgacaccatgctgcagagcttcgtcctcaacgccacc
gccacccgccacgacatggactcactcgccctgcgttacctgggctacgagaccaccaag
tacaccgacatcgccggcaagggcgccaagcagatcaccttcaaccaggtggcggtcgac
gatgccgtcaactacgccgccgaggacgccgacatcaccctgcgcctgcaccgcgtgctg
tcggcgaagctggccgaagagcccgcactggagaaggtctaccgggagatcgagatgccg
ctggtgccggtgctggaacgcatcgaggccaacggcgtgctggtcgacgccgacgaactg
cgaaaacagtcggccgacctgggcaagcgcatgctggaggcgcagcagaaggcgaccgag
ctggccggtcgcagcttcaacctggattcgcccaagcaggtgtgcgcgctgctgttcgag
gagctcaagctgccggcgatggtgaaaacgcccaagggccagccctcggcgaacgaggag
gcgctggaggcgatcgccgacctgcatgagctgccgcgtgtgatcctggattaccgcagc
ctggccaagctgcgcggcacctacaccgacaagctgccgcagatgatcaaccccgacacc
ggtcggctccataccagttaccaccaggcgggagctgccaccggacgtctggcctccagc
gaccccaacctgcagaacatcccgatccgcaccgtcgatggccgccacatccgcaccgcg
ttcgtcgccccgccgggccggcgcatcgtcgcctgcgactattcgcagatcgagctgcgg
atcatggcccacctgtcgggcgacgagggcctgctgcgtgcattcgcggccggcgccgac
atccacaaggcgaccgccgccgaggtgttcggcaagacgctggagaccgtcagcagcgac
gaccgccgcgccgccaaggcgatcaacttcggcctgatgtacggcatgagcgcgttcggg
ttggccaagcagctgggcgtgtcccgtggcgatgcgcaggactacatcggcctgtacttc
gcccgctacccgggcgtgcgcgagttcatggaccgcacccgcgagcaggcccgcgagcgc
ggctatgtggagaccgtgttcggccgccgcctgtatctggacaacatccacgcccgcaac
cagggcctgcgtgccggcgccgagcgcgcggcgatcaacgcgccgatgcagggcaccgcg
gcggacatcatcaagcgcgccatgatcgagatccactcatggcttgccgatcacgccggg
cgcgccctgatgatcctgcaggtgcacgatgagctggtgttcgaggtcgatgccgatttt
gtcgacacgctgctcgaggaggtggtcgcgcgcatggtcggtgccgcgcaattgcgggtg
cccctgttggtggaaagcggcgtgggcgccaactgggatgaagcgcactga
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