Novilysobacter avium: INQ42_01180
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Entry
INQ42_01180 CDS
T08144
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lavi
Novilysobacter avium
Pathway
lavi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
INQ42_01180 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lavi03400
]
INQ42_01180 (mutM)
Enzymes [BR:
lavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
INQ42_01180 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
INQ42_01180 (mutM)
DNA repair and recombination proteins [BR:
lavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
INQ42_01180 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF6011
preATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
QOW22261
LinkDB
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Position
complement(266047..266859)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRAALAPHLTGRTVTAATLRRTDLRWPIAPEITSLLPGRRILEVRRRAKYL
LLDTSVGSALLHLGMSGSLRVIPAHVPARPHDHVDLLLDNERVLRMHDPRRFGSVLWQAP
GSVHPLLAALGPEPLSDAFTGDYLYALSRGRRAPVKAFLMDQSVVVGVGNIYAAEALFAA
GISPLRSAERISRERYRLLVTEIRRVLESAITQGGTTLRDYVSPDGNSGYFVQQLAVYGR
GGKPCRNCGRPLRQAAIGQRTSVWCSHCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctacccgaagtcgagaccacccgcgctgccctcgcgccgcacctgaccgga
cggacggtcactgccgcaaccctgcgccgaaccgacctgcgttggccgatcgcaccggag
atcaccagcctgctgccgggccggcgcatcctggaggtgcgccggcgtgccaaatacctg
ttgctggacacgagcgtgggcagcgcgctgctgcatctggggatgtcgggcagtctgcgg
gtcatcccggcgcacgtaccggcacgcccgcacgaccacgtcgacctgctcctggacaac
gaacgcgtgctgcggatgcacgatccgcgtcgttttggcagcgtgctctggcaggcgccc
ggcagcgtccatcccttgttggcggcgctcggcccggagccgctgtcggatgcgttcacc
ggggactacctgtatgcgctgagccgcggacgccgcgcacccgtgaaagctttcctgatg
gaccagtccgtggtggtcggagtcggcaacatctacgccgccgaggccctgttcgcggcc
gggatatcgccgctgcggtccgccgagcggatttccagggagcgctaccgcctgctggtg
acggaaatccgccgggtactggaatcggcgatcacgcagggcggaacgacgctgcgcgac
tatgtcagcccggacggaaacagcgggtatttcgtgcaacaactggccgtctacggccgc
ggtggcaagccctgccgaaactgcggcaggccactcaggcaggcggcgatcggacaaaga
accagtgtctggtgcagccactgccagcgctga
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