Lysobacter avium: INQ42_03270
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Entry
INQ42_03270 CDS
T08144
Name
(GenBank) tetratricopeptide repeat protein
KO
K07114
Ca-activated chloride channel homolog
Organism
lavi
Lysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lavi02000
]
INQ42_03270
Transporters [BR:
lavi02000
]
Other transporters
Pores ion channels [TC:
1
]
INQ42_03270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_1
VWA_2
TPR_7
TPR_8
TPR_11
TPR_14
BatA
TPR_12
VWA
TPR_6
TPR_19
TPR_10
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
QOW22624
LinkDB
All DBs
Position
730822..732627
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AA seq
601 aa
AA seq
DB search
MIAALGQLQWLRPDWLWALALLPVLAWWWQRRRTRASIWTQAVDAHLLPHLLKPSPATRR
WLAPAIAALAFTLAVLALAGPSLREVQQPLWTQDSPLVVAVDLSSASLAADTPPSRIARV
RVKLASLLAGRQGGQVGLVAWAGEAFTVAPLTADTANVALFLDALDPDVMPVEGQRPDRA
IARSAQLLAQAGFQDGTILLLSDHATPAARAEAAKAKARGYTVSALGLGTAEGAPYRTAG
GAIDVARRDDASLQDLAAAGGGRYAALGESNDDLATLGVLDSRRGTGAADGAEPGTSVTT
RQDDGYWLLLPLMLLALLAFRRGAPVLLLVLCLWLPGRDALAADLWQRPDQRAHRTMQDA
EAAYRRGDFEEAAKIYADVDGADADYNRGNALARQGRYADAIAAYDQALKAAPTMEDAIA
NRRAVEAAMKRKPPPGPKSSSGESGEPKGDDDAGSGNSDPSSDADSQKKDPATDQDHDKD
AGDGRGGDTPAAQDEQDKSSRSGSDAQNGTDNEPEAADAEAQAAADAAQRERMREALESA
GEHGKSEGSAAADATPESADERERRVANEAWLRRIPDDPGGLLRRKFRIEYERRQREGST
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcggcgcttgggcaactgcagtggctgcggccggactggctgtgggcgctggcg
ctgctgccggtgctggcgtggtggtggcagcgccgccgcacccgcgccagcatctggacg
caggcggtggacgcccatctgttgccgcatctgctcaagccaagcccggccacgcgtcgc
tggctggcgccggcgatcgccgcattggcgttcaccctcgcggtgctggctttggccggc
cccagcctgcgcgaggtccagcaaccgctgtggacgcaggactcgccgctggtggtcgcg
gtcgacctgtccagcgcgagccttgccgcggatacgccgccgtcgcgcatcgcacgggtg
cgggtgaagctggccagcttgctcgccggtcgccaaggcgggcaggtcggtctggtcgcc
tgggcgggggaggcgttcacagtggcgccgctgaccgccgacaccgccaacgtcgccttg
tttctggacgcgctggaccccgatgtcatgccggtcgagggccagcgaccggaccgggcg
atcgcccggtcggcgcagttgctggcccaggccggattccaggacgggacgatcctgctg
ttgagcgatcacgcgaccccggcggcacgggcggaagccgccaaggcaaaggcgcgtggc
tacacggtatcggccctggggctggggacggcggagggagcgccgtatcgcacggccggc
ggcgcgatcgatgtcgcgcgccgcgatgatgcgtccttgcaggacctcgcggcggccggc
ggcggccgctacgccgcgcttggcgaaagcaacgacgatctcgcgacgctcggcgtactg
gattcccgccgtggcaccggcgctgcagacggtgcggagccgggcacttcggtcaccacc
cgtcaggacgacggctactggttgctgttgcccctgatgctgctggcgctgctcgcgttc
cgtcgcggcgcgcccgtcctgctgctggtgctgtgcctctggctgccgggtcgcgacgca
ttggcggcggacctgtggcaacggccggaccagcgcgcgcatcgcaccatgcaggacgcg
gaagcggcctaccggcgcggcgacttcgaagaggcggcgaagatctacgcggatgtcgac
ggcgccgacgcggactacaaccgtggcaacgcccttgcgcgccagggcaggtacgccgac
gccatcgccgcgtatgaccaggcactgaaggcggcgccgaccatggaggacgcgatcgcc
aaccggcgggcggtggaagcggcgatgaagcgcaagcctccgccgggcccgaagtcgtct
tcgggcgagtccggggagcccaagggcgacgacgatgcgggctccggcaacagcgaccct
tcgtccgatgccgacagtcagaagaaagacccggcgacggaccaggaccatgacaaggat
gccggcgacggtcgcggcggggatacgccggcggcgcaggacgagcaggacaagtcttcc
cgctcaggcagcgacgcccagaacgggacggacaacgagcccgaagccgccgatgccgag
gcccaggcggctgccgatgcggcgcagcgcgagcgcatgcgtgaagcgctcgaaagcgcg
ggagagcatggcaaaagcgagggtagtgccgctgccgatgcgacgcccgagagtgccgat
gagcgcgaacggcgcgtcgccaacgaggcctggctgcggcggatccccgatgatcccggc
ggcctgctgcggcgcaagttccggatcgaatacgagcgccgccagcgcgaagggagcacc
gattga
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