Novilysobacter avium: INQ42_03670
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Entry
INQ42_03670 CDS
T08144
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
lavi
Novilysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lavi03009
]
INQ42_03670 (dbpA)
Enzymes [BR:
lavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
INQ42_03670 (dbpA)
Ribosome biogenesis [BR:
lavi03009
]
Prokaryotic type
rRNA helicases
INQ42_03670 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOW22698
LinkDB
All DBs
Position
822168..823562
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AA seq
464 aa
AA seq
DB search
MTSNDREHSFATLDLSAQLLQGVAALGYTRLTPVQAQALPAILEGRDVIARAPTGSGKTA
AFGLGVLSRVDATRIQTQALVLCPTRELADQVGRQLRKLALGIPNLKLSVLCGGMPLAPQ
LASLATHDPQVVVGTPGRIQELLRKKALHLRGVHTLVLDEADRMLDMGFEDQIREIVGKL
PADRQGLMFSATFPDAIRTLAGAMLRTPLQVTVESSESPTRIRQLFYEVEPGRKTPLLAA
LLLQFRPESCVVFCNMRRDTEEVVASLAHYGFTALALHGDMEQRDRDEILLRFANRSCSV
LVASDVAARGLDVEDLATVVNYELPTDADTYVHRIGRTGRAGREGLALSLCSPAEVSRAD
MIALHTGTPLEWMRATPLAGKATGVAPAAMVTLRIDGGKTDKLRPGDIVGALTGDAGLPS
SAIGKIDVFARRSYVAVARGKADAALARLREGRIKNRRFRIQRI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaacgaccgcgagcactccttcgccaccctcgatctctccgcccagcttttg
cagggtgtcgcagcgctgggttataccaggctcactccggtacaggcgcaggccttgccg
gcaatcctggaggggcgcgacgtcattgcgcgggccccgaccggaagcggcaagaccgcg
gcgttcggactcggtgtcctcagccgggtggatgcgacccggatccagacccaagcactg
gtgctttgtccgacccgtgagctcgccgaccaggtcggacggcagctgcggaagctggcg
ctgggtattcccaacctgaagctgtcggtgctgtgcggcgggatgccgctcgcgccccag
ctggcgtcgctggccacccacgatccccaggtcgtggtcggcacgccggggcggatccag
gagctgctgcgcaagaaggcgctgcatcttcgcggcgtgcatacgctggtgctggatgag
gcggaccggatgctcgacatgggcttcgaggaccagatccgcgagatcgtcggcaagctg
cccgcagatcggcaggggctgatgttctcggcgacgttcccggacgcgatccgcaccctg
gccggcgcgatgctgcgcacgccgctgcaggtcactgtggaatcgtcggaaagcccgacc
cgcatccgccagctgttctacgaagtggagccaggacgcaagacgccgctgctggcggcg
ctgctgctgcagttccgcccggagtcgtgcgtggtgttctgcaatatgcgccgcgacacc
gaggaggtcgtcgcttcgcttgcccactacggattcacggcgctggcgctgcacggcgac
atggagcagcgcgaccgcgacgagatcctgctgcgctttgccaaccgcagttgcagcgtg
ctggtcgccagtgacgtcgccgcgcgggggctggatgtcgaggacctggccacggtggtc
aattacgagctcccgacggacgcggatacctacgtgcaccgcatcggtcgcaccggccgc
gccggtcgggaagggctggcgctgagcctttgttcccccgcggaagtgtcgcgcgccgac
atgatcgccctgcatacgggcacgccgctggaatggatgcgcgccacgccgcttgccggc
aaggcgactggtgtcgctccggcggcgatggtcaccttgcgcatcgacggcggcaagacc
gacaagctgcgcccgggcgacatcgtcggcgcgctgaccggagatgcgggcctgccgtcc
tcggcgatcggcaagatcgacgtgttcgccaggcgctcctatgtcgccgtcgcccgcggc
aaggccgacgcggcgctggcccgcctgcgcgaaggcaggatcaagaaccggcgcttccgc
atccagcgcatctga
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