Novilysobacter avium: INQ42_03795
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Entry
INQ42_03795 CDS
T08144
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lavi
Novilysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lavi03016
]
INQ42_03795 (truD)
Enzymes [BR:
lavi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
INQ42_03795 (truD)
Transfer RNA biogenesis [BR:
lavi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
INQ42_03795 (truD)
Prokaryotic type
INQ42_03795 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QOW22720
LinkDB
All DBs
Position
845397..846476
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AA seq
359 aa
AA seq
DB search
MSDAGAAGPADSAPAADTRAHGEPVLSARMRAAPEDFFVEELAGFEPSGSGEHLLLTVQK
RGMNTAFAARSIAQWAGVDDMAIGYAGLKDRHAVTRQRFSVHLPRKVAPDVAALQVDGLQ
VLEQAWHAKKLPRGALAGNRFVLVLRDVVGDPAAIEARLQQIARRGVPNFFGEQRFGRDG
NNLGKALAMFEARRVRRDERGMLLSAARSVLFNQVLQARVEAHCWDTPLKGEVWMLDGSR
SVFGPEPVTPEIEQRLSAFDIHPSGPLWGRGELRSKDDALELEQGALADQVSMRLRAGLE
QAGLKQGRRSLRLRADALRWHWLDAATLELSFNLPPGTYATVVLAELGAVFDGSGPSGA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgccggcgcggcgggtcccgcggacagtgcgcccgccgctgacacgcgtgcc
cacggcgagcccgtgctgtccgcccggatgcgcgcagcgccggaggacttcttcgtcgag
gaactggccggcttcgaaccctccggcagcggcgagcacctgcttctgacggtgcagaag
cgcggcatgaacaccgctttcgccgcccgcagcattgcccagtgggccggcgtggacgac
atggcgatcggctacgccgggctgaaggatcgccacgcggtgacccgccagcgcttcagc
gtgcacctgccgcgcaaggtcgccccggacgttgccgcgttgcaggtggacggactgcag
gtgctggaacaggcgtggcacgcgaaaaagctcccgcgcggtgcgctggccggcaaccgc
ttcgtgctcgtcctgcgcgacgtcgtcggcgaccccgccgcgatcgaggcgcgcctgcag
cagattgcccggcgcggcgtgccgaacttctttggcgagcagcgatttggccgcgatggc
aacaacctgggcaaggcgctggcgatgttcgaagcccgccgggtccgtcgcgacgaacgc
ggcatgctgctctcggccgcgcgctcggtgctgttcaaccaggtgctgcaggcgcgggtc
gaggcgcactgctgggatacgccgttgaagggcgaggtgtggatgctggatggcagccgc
agtgtgttcgggcccgaaccggtcactccggagatcgaacagcgcctgtcggcgttcgac
atccatcccagcggcccgctgtggggccgcggcgagctgcgcagcaaggacgatgcgctg
gagctggagcagggcgcactggccgaccaggtatcgatgcgcctgcgcgccggtctggag
caggccggcctgaagcaggggcggcgatcgctgcgcctgcgcgccgacgccctgcgctgg
cactggctggacgccgcgacgctggagctgtcattcaacctgccgccgggcacctacgcc
acggtggtgctggcggaactgggcgcggtcttcgacggctccggcccgtccggcgcctga
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