Novilysobacter avium: INQ42_03950
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Entry
INQ42_03950 CDS
T08144
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
lavi
Novilysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lavi03019
]
INQ42_03950 (rapZ)
Messenger RNA biogenesis [BR:
lavi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
INQ42_03950 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_16
AAA_18
AAA_22
Integrase_1
T2SSE
FtsK_SpoIIIE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QOW22747
LinkDB
All DBs
Position
complement(875796..876722)
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AA seq
308 aa
AA seq
DB search
MDKTENDLPTPPTDEKPLAEAALVIVSGMSGSGKSVALKTFEDLGYYCVDNLPAELLPAF
VRAATANLAETETAKLAVGIDVRTSHRDLASIPGWLAELGKLGMDPRVIFLETRDDILIK
RYADTRRRHPLSHLGLALADAIALERQVLRPLRQLADSQLDTSDLNVHQMRRHIITRFAL
GDTSTVSLLFESFAYRHGVPADADFVFDARCLPNPHWDPGLRPLSGRDAPVAEFFANQPL
VNEFADQVGALLETWLPRLHTDTSRSYITVAFGCTGGRHRSVYLAERMARAAREQGWDEV
AVHHRELD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacaagacggaaaacgacctccccacgccccccaccgatgagaaaccgctcgctgaa
gcggcgctggtgatcgtcagtggcatgtccggctcgggcaaatccgtagccctgaagact
ttcgaggatctgggctactactgcgtcgacaacctcccggccgagctgctgccggcattt
gtccgcgccgccaccgccaacctggccgaaacggagaccgcaaaactggccgtcggcatc
gacgtacgcaccagtcaccgcgacctggccagcatcccgggatggctcgccgagctgggc
aagctgggcatggacccgcgggtgattttcctggagacccgtgacgacatcctgatcaag
cgctacgccgacacccgccgccgccacccgctcagccacctgggcctggcgctggcggat
gcgatcgcgctggagcgccaggtgctgcgtccgctgcgccagctggccgattcccagctg
gataccagcgatctcaacgtccaccagatgcggcggcacatcatcacccgcttcgcgctg
ggtgacaccagcactgtctcgctgctgttcgagtccttcgcctaccgccacggcgtgccg
gcggatgccgacttcgtgttcgatgcgcgctgcctgcccaatccgcattgggatcccggc
ctgcgaccgctgtcgggaagggatgctccggtggcggagttctttgccaaccagccgctg
gtgaacgagttcgccgaccaggtcggcgcactgctggaaacctggctgccgcgcctgcac
accgacaccagccgcagctacatcaccgtcgcctttggttgcaccggcggccgccaccgc
tcggtgtatctggccgagcgcatggcccgtgccgcgcgcgagcagggctgggacgaagtc
gccgtgcaccaccgcgaactggactag
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