KEGG   Novilysobacter avium: INQ42_04200
Entry
INQ42_04200       CDS       T08144                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
lavi  Novilysobacter avium
Pathway
lavi00521  Streptomycin biosynthesis
lavi00523  Polyketide sugar unit biosynthesis
lavi00525  Acarbose and validamycin biosynthesis
lavi00541  Biosynthesis of various nucleotide sugars
lavi01100  Metabolic pathways
lavi01110  Biosynthesis of secondary metabolites
lavi01250  Biosynthesis of nucleotide sugars
Module
lavi_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:lavi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    INQ42_04200 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    INQ42_04200 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    INQ42_04200 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    INQ42_04200 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    INQ42_04200 (rfbB)
Enzymes [BR:lavi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     INQ42_04200 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short
Other DBs
NCBI-ProteinID: QOW22786
UniProt: A0A7S6UM75
LinkDB
Position
924873..925928
AA seq 351 aa
MPTWLVTGGAGFIGGNFVLDAVQRGIKVVNLDALTYAGNLDTLSSLDGNPSHVFVHGDIG
DAALVARLLREHQPDAVINFAAESHVDRSIDGPAEFVQTNVVGTLSLLEQVRDYWKSLDG
SRAADFRFLHVSTDEVYGTLGDTGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYQFPEKLIPLIIAKALAGEPLPIYGDGLNVRDWLFVSDHCAAIRRVLEA
GRVGEVYNVGGEAERTNIVVVQTICRLLDQRRPLADGRKRESLITYVQDRPGHDRRYAID
ASKLHGELAWEPAITFDEGMARTVDWYLDNAPWVQRVMDGSYRLERIGGVA
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgccgacgtggttggtgaccggcggggccggttttattggcggaaatttcgtccttgat
gcggttcagcgggggatcaaggtggtcaaccttgacgccctgacctacgcgggcaacctg
gacaccctgtcatcgctggatggcaatccgtcgcacgtgttcgtccacggcgacatcggc
gacgccgcactcgtggctcggctgttgcgcgagcaccagcccgacgcggtgatcaatttc
gccgccgagagccatgtggatcgctccatcgatggccccgccgagttcgtccagaccaac
gtggtgggcacgctcagcctgctggagcaggtccgcgactactggaagtcgctggacggc
tcgcgcgcggcggatttccgcttcctgcacgtctccaccgacgaggtctacggcaccttg
ggggatacggggaagttcaccgaaaccacgccgtacgcgcccaactcgccgtactccgct
tccaaggcggcgtccgaccacctggtgcgtgcgttccaccacacctacggcctgccggta
ctcaccaccaactgctccaacaactacgggccttaccagttcccggagaagctcattccg
ctgatcatcgccaaggcgctggccggcgagccgctgccgatctacggcgatggcctcaac
gtgcgcgactggctgttcgtgtccgaccactgcgcggcgatccgacgtgtgctggaggca
ggtcgggtgggcgaggtttataacgtcggcggtgaggcggagcgcaccaacattgtcgtg
gtgcagacgatctgccggctgctcgaccagcgacggccgcttgccgacggccgcaagcgc
gaatcgctgatcacctacgtccaggaccgccccggccatgaccgccgctacgcgatcgat
gccagcaagctgcacggcgaactggcctgggagccggcgatcacctttgatgagggcatg
gcacggaccgttgactggtacctggacaacgcgccgtgggtgcagcgggtgatggacggc
agctaccggctcgagcgcatcggtggcgtggcgtga

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