Novilysobacter avium: INQ42_04295
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Entry
INQ42_04295 CDS
T08144
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lavi
Novilysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lavi03016
]
INQ42_04295 (miaB)
Enzymes [BR:
lavi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
INQ42_04295 (miaB)
Transfer RNA biogenesis [BR:
lavi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
INQ42_04295 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QOW22803
LinkDB
All DBs
Position
complement(948549..949946)
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AA seq
465 aa
AA seq
DB search
MTDSTTSSPITEEPVASTAPRGKLFIETHGCQMNEYDSAKMADVLAASDGLELTANAADA
DVILINTCSIREKAQDKVFSRLGRWKSLKKDGKAVLIGVGGCVASQEGEAIVKRAPYVDL
VFGPQTLHRLPELIRDRRESGLPQVDISFPEIEKFDRLPEPRAEGPSAYVSIMEGCSKYC
SFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREIHLLGQNVNAYAGAIIGEDGQAEIAD
LGLLVRTIAQMDGVERIRFTTSHPLEFSDSLVEAYRDVPELANYLHLPVQAGSDRVLAAM
KRGYTTLEFKQKIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVGFDQSYSFV
YSRRPGTPAADLEDTTTDAEKHARLARLQAAINDNARRISESMLGSTQRVLVEGRSRRDA
NELTGKTENMRSVNFAGDPAMIGQFVDIVVTEVMANSLRGRVAEI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattccacgacctcaagcccgatcaccgaagaacccgttgcgtccactgcgccg
cgcggcaaattgttcatcgagacgcacggttgccagatgaacgagtacgactcggcgaag
atggccgacgtcctcgccgcgtccgacgggctggagctgaccgccaacgcggccgacgcg
gacgtgatcctgatcaacacctgctcgatccgcgagaaggcgcaggacaaggtgttcagc
cgactggggcgctggaagtcgctgaagaaggatggcaaggcggtgttgatcggcgtgggc
gggtgcgtggccagccaggaaggcgaggcgatagtgaaacgcgcgccctacgtggacctg
gtgttcgggccacagaccctgcatcgcctgcccgagctgatccgcgaccggcgcgagtcc
ggcctgccccaggtcgacatcagctttccggagatcgagaagttcgaccggttgcccgag
ccgcgggctgaagggccgtcggcgtacgtgtcgatcatggaaggctgcagcaagtactgc
agcttctgcgtcgtgccctacacccgtggcgaagaggtcagccggccgtttgaggacgtg
ctggtggaagtcgcccagctcgcggcgcaaggcgtgcgcgagatccacctgctgggccag
aacgtgaatgcctatgccggcgcgatcatcggcgaggacggccaggcggagatcgccgac
ctcggcctgctggtgcggacgatcgcccagatggacggcgtcgagcggatccgcttcacc
acctcgcacccgctggagttttccgactcgctggtggaggcctaccgcgacgtcccggag
ctggccaactacctgcacctgccggttcaggccggcagcgaccgcgtcctggcggcgatg
aagcgcggctacaccacactcgagttcaagcagaagatccgcaagctgcgcgcggtgcga
ccggacatctcgatctcctcggacttcatcgtcggctttcccggcgagaccgaggccgac
ttcgagaagacgatgaagctgatcgaggacgtcgggttcgaccagtcctactcgtttgtc
tactcgcgccgtcccgggacgccggcggcggacctggaggacaccacgaccgacgccgaa
aagcatgcgcggctggcccgcctgcaggcggcgatcaacgacaacgcgcgacggatcagc
gaatcgatgctcggcagcacccagcgggtgctggtggaaggacgctcgcgccgcgatgcc
aacgagctgaccggcaagaccgagaacatgcgttcggtcaacttcgccggcgatccggcg
atgatcggccagttcgtcgacatcgtggtgaccgaagtgatggccaactcgctgcgcgga
agggtggcggagatctga
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