Novilysobacter avium: INQ42_04780
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Entry
INQ42_04780 CDS
T08144
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
lavi
Novilysobacter avium
Pathway
lavi03060
Protein export
lavi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
INQ42_04780 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
INQ42_04780 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lavi02044
]
INQ42_04780 (secD)
Secretion system [BR:
lavi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
INQ42_04780 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecDF_P1_head
SecD_1st
SecD_SecF_C
ACR_tran
Sec_GG
MMPL
AtuA
RRF
Motif
Other DBs
NCBI-ProteinID:
QOW22890
LinkDB
All DBs
Position
1039676..1041541
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AA seq
621 aa
AA seq
DB search
MLTYARWKYVVLVLAILFSTIYALPNLYQKDPSVQVTANRGAPIDEALVQRVSETLRKSG
IPTKQVAIDGDNLLVRLTGTDDQSKAADALAPVLGNDYVTALNLASTVPPWLDNIGAHGM
LLGLDLQGGVHFLMQVDQKAALDKHLDAIVEDVRVVLRDGRVRYESVTRRPDNSVNVRLV
DAADAAAARKKIMASQPDLRLDGNGQVLTLQIPEPEMQRMMTDALNQNLGTLRNRINALG
VAEPLIQRQGNDRIVVELPGVQDTAQAKRVIGATATLEYRAVVEGDAYDAVATGNVPPQA
KVYYRRELGIDGKPVPILLNKRVIASGDQLVGATSGLDPQSGTPSVSVKLDSSGGQRMFD
FTSASVGKPMAVVYIERIPQVRMVDGKEIRSTKVSEEVISVANINGVFGKDFQTTGLESM
KEASDLALLLRSGSLAAPMDFVEERIVGPSLGRENIERGVKAVVFSFSFVLLFFLIYYRM
FGIITCAALLLNILMLVAVMSLFGFTMTLPGMAGIALTVGLSVDANVLINERIREELRLG
VPPKSAIALGYEKATSTIVDANLTTLLAGVAMFAFGTGPVKGFAVALIVGIITSMYTAVS
ASRGMATLLYGNRRKLKSIAI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctcacttacgcgcgctggaaatacgtcgtcctggtgctggccatcctgttcagcacg
atctacgcgttgccgaacctgtaccagaaggatccctcggtgcaggtcaccgccaaccgc
ggcgccccgatcgacgaggcgctggtccagcgcgtgtccgaaacgctgcgcaagtccggg
attccgaccaagcaggtcgccatcgatggtgacaacctgctggtgcgcctgaccggcacg
gacgaccagtccaaggccgccgacgcgctggcgccggtgctgggcaacgactacgtcacc
gcgctgaacctggcatcgactgtcccgccgtggctcgacaatatcggcgcccacggcatg
ctgctcggccttgacctgcagggcggcgtccacttcctgatgcaggtcgaccagaaggcg
gcgctggacaagcacctggatgcgatcgtcgaggacgtgcgcgtggtcctgcgcgacggg
cgcgtgcgctacgagtcggtcacccggcgcccggacaactcggtcaacgtgcgccttgtg
gacgcggccgatgcggctgcggcgcgcaagaagatcatggccagccagccggacctgcgc
ctggacggcaatggacaggtcctgaccttgcagatcccggaaccggaaatgcagcggatg
atgaccgacgcgctgaaccagaacctgggtacgctgcgcaaccgcatcaacgcgctgggc
gtggccgagccgctgatccagcgtcagggcaacgaccgcatcgtggtcgagctgcccggc
gtgcaggacaccgcgcaggccaagcgcgtgatcggcgcgaccgcgacactggaataccgc
gcggtggtcgaaggcgatgcctacgacgccgtggccaccggcaacgtgccgccgcaggcc
aaggtctattaccggcgcgagctgggaatcgacggcaagccggtgccgatcctgctcaac
aagcgggtgatcgcctccggtgaccagctggtcggcgcgacctcgggcctggatccgcag
tcgggcacaccgtcggtctcggtcaagctggacagttccggcggccagcgcatgttcgac
ttcaccagtgccagcgtcggcaagccgatggcggtggtctacatcgagcgcatcccgcag
gtccggatggtcgatggcaaggagatccgaagcaccaaggtcagcgaggaggtcatctcg
gtggccaacatcaatggcgtgttcggcaaggatttccagaccaccggcctggaaagcatg
aaggaggcgtccgacctggcgctgctgctgcgctcaggctcgctggccgcgccgatggat
ttcgtggaagagcgcatcgtcggccccagcctgggccgcgagaacatcgagcgcggcgtg
aaggcggtcgtgttctccttcagcttcgtgctgctgttcttccttatctattaccgcatg
ttcggcatcatcacctgcgcggcgctgttgctgaacatcctgatgctggtggcggtaatg
tcgcttttcggcttcaccatgaccttgccgggaatggccggtatcgcgctgaccgtcggc
ctgtcggtggatgcgaacgtgttgatcaacgagcgaatacgcgaggaattgcggctcggc
gtgccacccaagtcggccattgcactgggctacgagaaggccaccagcacgatcgtggat
gccaacctgaccaccttgctggccggcgtggccatgtttgcctttggcaccggcccggtg
aagggatttgctgtcgcactcatcgtgggcatcatcacctcgatgtacaccgcggtttcc
gcctcgcgcgggatggcaacgctgctctacggcaatcgccgcaagctcaagtccattgcg
atctga
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