Lysobacter avium: INQ42_06875
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Entry
INQ42_06875 CDS
T08144
Name
(GenBank) pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
lavi
Lysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lavi03009
]
INQ42_06875
Enzymes [BR:
lavi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
INQ42_06875
Ribosome biogenesis [BR:
lavi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
INQ42_06875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QOW21029
LinkDB
All DBs
Position
complement(1510561..1511274)
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AA seq
237 aa
AA seq
DB search
MRLNKHISESGFCSRREADRLISEGRVTVNGIRARVGSEVGEDDEVKVDGQALRVRTVAK
GKRKHVYIMLNKPVGITCTTESAVDGNIVDFIGHEQRIFPIGRLDKDSEGLILLTSNGDI
VNEILRAENKLEKEYLVAVNHDVTPEFLRAMAKGVPIHGQTTLPCKTSKLGRFGFRIVLV
QGLNRQIRLMAAYFKFRVKTLVRVRIGNVKLGRLKIGQWRNLTDEELQRLIPHRTDW
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcaacaaacacatcagcgaaagcgggttctgttcccgtcgcgaagccgatcgc
ctgatctcggagggtcgcgtgacggtcaacggaatccgcgcgcgggtcggctccgaagtc
ggcgaagacgacgaagtcaaggtggatggccaggcgctgcgtgtgcgaaccgtggccaag
ggcaagcgcaagcacgtctacatcatgctcaacaagccggtcgggatcacctgcacgacc
gagtcggcggtggacgggaacatcgtcgacttcatcggtcatgagcagcgaatctttccc
atcggccgcctggacaaggattcggaagggctgatcctgctgaccagcaacggggacatc
gtcaacgagatcctgcgcgccgaaaacaagctggagaaggagtacctggtggcggtcaac
cacgacgtaaccccggaattcctgcgcgcgatggccaagggagtgcccatccacggccag
accacgttgccctgcaagacctccaagctggggcgtttcggctttcgcatcgtgctggtg
cagggactcaatcggcagatccgactgatggccgcgtatttcaagttccgggtcaagacc
ctggttcgcgtgcgtatcggcaacgtcaagctgggtcggctgaagatcggccagtggcgc
aacctgaccgacgaggaactgcagagactgatcccgcaccgcaccgattggtga
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