Novilysobacter avium: INQ42_06925
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Entry
INQ42_06925 CDS
T08144
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lavi
Novilysobacter avium
Pathway
lavi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
INQ42_06925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lavi03400
]
INQ42_06925
DNA repair and recombination proteins [BR:
lavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
INQ42_06925
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
INQ42_06925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
DnaJ_CXXCXGXG
AAA_29
AAA_16
AAA_25
AAA_33
RsgA_GTPase
DUF4350
Anti-TRAP
DUF5351
Motif
Other DBs
NCBI-ProteinID:
QOW21039
LinkDB
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Position
complement(1523480..1526122)
Genome browser
AA seq
880 aa
AA seq
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MSSHPVSANRTRKPPRLGTPTSGDDDGFVRVRGAREHNLQDIDVDIPRDALVVFTGVSGS
GKSSLAFGTLYAEAQRRYLDSVAPYARRLIDQAGVPDVDAINGLPPAVALQQQRGSPSTR
SSVGSVTTVSNSLRMLYSRAGDYPPGQPIIYADGFSPNTPQGACPRCHGLGSVHEVSERS
MVPDDTLTIRERAIAAWPPAWHGQNQRDILVTLGYDIDIPWRELPQEQRDWILFTDEQPV
VPVYRDLSPAETREAIERGDNPSYKGTFTSAQRYVLHTFATTRSAMIKKRVARYMVSAMC
PLCEGKRLRREALLVTFAGLDIGELSRLPLKELAVLLEPVAHGAAADSPQAHEHPEQAIV
AQRIAADLLARIEVIAALGLGYLTLERTTPTLSPGELQRLRLATQIRSNLFGVVYVLDEP
SAGLHPADTQALLAALDQLKGAGNSLFVVEHETDVIRRADWVVDVGPAAGEQGGRVVYSG
PLDGLARVSESQTARYLFPSPGAGDEGASSDERGGPIGQAGRKPRVPTDWLRLEGVSRNN
LDNLAVAFPLGVFTTVTGVSGSGKSSLVSQALVELLSEHLGKPAGSDSDEDDPLEPAPVT
RGGRIVAGLDAVKRLVVVDQKPIGRTPRSNLATYTGLFDQVRKLFAATPEARARGYDAGR
FSFNVAKGRCPTCEGEGFVSVELLFMPSVYAPCPQCHGARYNAETLEITWSGLTIAGVLA
LTVDAAAGFFADAPAVLRPLEVLREVGLGYLRLGQPATELSGGEAQRIKLASELQRAQRR
GTVYLLDEPTTGLHPADVDVLMRQLDGLVEAGNTVIVVEHDMRVAAASDWIIDIGPGAGD
EGGRVVVQGTPREVTRSAASRTAPFLLDGIQGSTVPDRQD
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcaccctgtcagcgcaaaccgtacacgcaagccgccacgcctgggcacgccc
acgtccggcgatgacgacggtttcgtccgggtgcgcggcgcccgcgagcacaacctgcag
gacatcgatgtcgacatcccgcgcgacgcgctggtggtgttcaccggagtgtccggctcg
ggcaagtcctcgctggcgttcggcaccctctacgccgaggcccagcggcgttacctggac
tcggtcgcgccctatgcgcgcaggctgatcgaccaggccggcgtgccggacgtggacgcc
atcaatggcctgccaccggcggtcgcattgcagcagcagcgtggctccccgagcacgcgt
tcctcggtgggcagcgtcaccacggtgtccaactcgctgcgcatgctctattcccgcgcc
ggcgactatccgcccgggcagccgatcatctatgcagacgggttttcgcccaacacgcct
cagggcgcgtgtccgcgctgccacgggctgggcagcgtgcatgaggtcagcgaacgctcg
atggtccctgacgacaccctgaccatccgcgagcgcgcgatcgccgcctggccgccggcg
tggcacggccagaaccagcgcgacatcctggtcacgctgggctacgacatcgacattccc
tggcgggaactgccgcaggagcagcgcgactggatcctgtttacagacgagcagccggtg
gtgccggtgtaccgcgacctgagccctgcagagacccgcgaggcgatcgagcgcggcgac
aaccccagctacaagggcacgtttaccagcgcgcagcgctacgtgctgcacacgttcgcg
accacccggagcgcgatgatcaagaagcgtgttgcgcgctatatggtcagtgcgatgtgc
ccgctgtgcgagggcaagcgcctgcgtcgcgaggcgctgttggtcacgtttgccgggctg
gatatcggcgagttgtcgcggctgccgctgaaggaactcgctgtgctgctggagccggtc
gcgcacggcgcggctgcagattcgccgcaagcgcatgaacatccggagcaggcgatcgtc
gcgcagcgcattgccgccgacctgctggctcggatcgaggtcatcgccgcgctgggcctg
ggctacctgaccctggagcgcaccacgcccacgctgtcaccgggcgagctgcagcggttg
cggctggccacgcagatccgctccaatctgtttggggtcgtgtatgtgcttgacgagccg
tcagcagggctgcatccggccgatacgcaggcgctgctggcggcgctggatcagctcaaa
ggcgccggcaactcactgttcgtggtcgagcacgaaaccgacgtgatccgccgcgccgac
tgggtggtcgatgtcggcccggcggcgggcgagcagggcgggcgggtggtctacagcggt
ccgctggacgggctggccagggtcagcgagtcgcagaccgcgcgctacctgttcccatcc
cctggcgcgggtgatgagggtgcgtccagcgacgagcggggcgggccgatcggtcaggcg
ggacgtaagccgcgcgttcccaccgactggttgcggctggagggcgtcagccgcaacaac
ctcgacaacctggccgttgcttttccgctgggcgtgttcaccacggtcaccggggtatcc
ggttcgggcaagtccagcctggtcagccaggcgctggtcgagttgctgtccgagcacctc
ggtaaaccggccgggagcgacagtgatgaggacgacccgctggagccggcgccggtgacc
cgcggcggccggatcgttgccggactcgacgcggtcaagcggctggtggtggttgaccag
aagccgatcggccgcacgccccgctccaacctggcgacctacaccggactgttcgaccag
gtccgcaagctgttcgccgccacgccggaagcgcgcgccaggggttacgacgcgggccgg
ttctcgttcaacgtcgccaagggccgctgcccgacctgcgagggcgagggcttcgtcagc
gtggagctgctgttcatgcccagcgtctatgccccgtgcccccagtgccacggcgcgcgc
tacaacgccgagacgctggagatcacctggagcggcctgaccatcgccggagtgttggcg
ctcacggtggatgcggcggccggcttctttgccgacgccccggcagtgttgcgcccgctg
gaggtgctgcgcgaggtcgggctgggctatctgcggctgggccagccggccacggaactg
tcaggcggcgaggcccagcgcatcaagctggccagcgaactgcagcgtgcgcagcggcgc
ggcacggtctacctgctcgacgagcccactaccgggctgcatccggcggacgtggacgtg
ctgatgcgccagctggacgggctggtggaagcgggcaacaccgtcatcgtggtcgagcac
gacatgcgcgtggcggcagccagcgactggatcatcgatatcggaccgggtgccggcgac
gagggtgggcgagtggtggtgcaggggacgccgcgggaggtgacgcgctcggcggcaagc
cggacggcgccattcctgctcgatgggatccagggatcgacagtcccggatcgtcaggac
tga
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