Novilysobacter avium: INQ42_07810
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Entry
INQ42_07810 CDS
T08144
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lavi
Novilysobacter avium
Pathway
lavi00020
Citrate cycle (TCA cycle)
lavi00190
Oxidative phosphorylation
lavi00650
Butanoate metabolism
lavi00720
Other carbon fixation pathways
lavi01100
Metabolic pathways
lavi01110
Biosynthesis of secondary metabolites
lavi01120
Microbial metabolism in diverse environments
lavi01200
Carbon metabolism
Module
lavi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lavi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lavi_M00149
Succinate dehydrogenase, prokaryotes
lavi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
INQ42_07810
00650 Butanoate metabolism
INQ42_07810
09102 Energy metabolism
00190 Oxidative phosphorylation
INQ42_07810
00720 Other carbon fixation pathways
INQ42_07810
Enzymes [BR:
lavi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
INQ42_07810
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
Pyr_redox_2
DAO
GIDA
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QOW21193
LinkDB
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Position
complement(1735373..1737163)
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AA seq
596 aa
AA seq
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MPAYKIQEHKFDMVVVGAGGAGLRATFGLAQKGLKTACITKVFPTRSHTVAAQGGIAGAL
GNMGEDDWRYHFYDTVKGSDWLGDQDAIEYMCREAIPAIVELEHQGVPFSRTPEGKIYQR
PFGGMTTKYGEGPPAQRTCAAADRTGHAILHTLYQQSLAHHAEFFIEYFALDLIMDADGV
CRGVLALDMAEGTLHLFRSQGTVLATGGYGRAYFSATSAHTCTGDGNGMALRAGLALQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNASGERFMERYAPSAKDLASRDVVSRAMTME
IREGRGVGEHKDHMLLDLTHLGPEVIHEKLPGIAESARIFANVDVEKQPIPVIPTVHYNM
GGVPTNYHGEVVQLKNGDPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETLTPGAKHPDLPADACDASLAHLDKLRNANGSTPTAVIRDQMQRAMQADAAVFRTE
ETLAEGVGRIREIRASFEDVKVSDRSLIWNSDLVETFELSNLLGQALSTIVCAENRTESR
GAHARDDYPERDDANWHKHSLCWVDEAGNTKIDYRPVHMYTLTDDVDVVPPAKRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcttacaagatccaggaacacaaattcgacatggtcgtggtgggcgccggcggc
gccgggctgcgcgcgaccttcggtcttgcccagaagggcctcaagacggcgtgtatcacc
aaggtcttcccgacccgctcacacacggtggccgcgcaaggtggcatcgccggcgcgctg
ggcaacatgggcgaggacgactggcgctaccatttctatgacactgtgaagggctcggac
tggctgggcgaccaggacgcgatcgaatacatgtgccgtgaggccatcccggcgatcgtc
gaacttgagcaccagggcgttccgttctcgcgtacacccgagggcaagatctaccagcgt
ccctttgggggcatgaccaccaaatacggcgagggcccgcccgcccagcggacctgcgct
gctgccgaccgcaccggccacgcgatcctgcacacgctttaccagcagtcactggcgcac
catgccgagttctttatcgagtacttcgcgctggacctgatcatggatgcggacggcgtt
tgccgcggcgtcctggcgctggacatggccgaaggcacgctgcacctgttccgttcccag
ggcacggtgctggcgaccggcggttacggccgcgcgtatttctcggcgacttccgcgcac
acttgcaccggcgacggcaatggcatggcgctgcgagccgggctcgcgctgcaggacatg
gagttcgtgcagttccacccgaccggcatctacggtgcgggctgcctgatcaccgaaggc
gtccgcggcgaaggcggcatcctgcgcaacgccagtggcgagcgtttcatggagcgctac
gcgccatcggcgaaggacctggcctcgcgcgacgtggtcagccgcgcgatgacgatggaa
atccgcgaaggccggggcgttggcgagcacaaggaccacatgctgctcgatctgacccac
ctgggcccggaagtgatccacgagaagctgcccggcatcgccgagtcggcgcgcattttc
gccaacgtcgatgtggaaaagcagccgattccggtcatcccgaccgtgcactacaacatg
ggcggcgtgccgaccaactaccacggcgaagtcgtgcagttgaagaacggcgatcccgat
gcggtggttcccggcctgtatgccatcggcgaggcggcttgcgtgtcggtgcacggcgcc
aaccgcttgggctccaactcgctgctcgacctggtggtgttcggtcgcgcggtcgcgaac
cgctgcgccgagacgctcactcccggcgcgaagcatcccgacctgccggccgacgcctgt
gacgcatcgttggcgcatctggacaagctgcgcaacgccaatggcagcacaccgaccgca
gtcatccgcgatcagatgcagcgtgcgatgcaggctgacgctgcggtgttccgcaccgag
gaaacgctggcggagggcgtgggccggatccgtgagatccgggcctctttcgaagacgtc
aaggtcagcgatcgctccctgatctggaactccgacctggtggaaaccttcgaactgtcg
aacctgctgggccaggcgctgtcgacgatcgtctgcgcggagaaccgcaccgagtcacgc
ggcgcccatgcgcgcgacgactatccggagcgcgacgatgcgaactggcacaagcactcg
ctgtgctgggtcgacgaagcgggcaatacgaagatcgactatcggccggtgcacatgtac
acgctgacggacgacgtggacgtggtcccgcctgcaaagcgggtctactga
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