Novilysobacter avium: INQ42_08020
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Entry
INQ42_08020 CDS
T08144
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lavi
Novilysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lavi03016
]
INQ42_08020 (truA)
Enzymes [BR:
lavi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
INQ42_08020 (truA)
Transfer RNA biogenesis [BR:
lavi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
INQ42_08020 (truA)
Prokaryotic type
INQ42_08020 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QOW21229
LinkDB
All DBs
Position
complement(1777924..1778793)
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AA seq
289 aa
AA seq
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MENGTLPDPIGPDSPVQTAAENRSSQRRWVLGVEYDGGSFSGWQRLNRRDEPERRTEPTV
QAAVEQAVSIVAGRGVGVVCAGRTDAGVHAATQVVHFDGPAQRDPRGWVLGTTSNLPPSV
CVKWCVPTSDEFHARFSARARRYRYTILNRAVRPALQHQYLSWVRKALDADAMHQAAQHL
VGEHDFSAFRTVHCQAPHARRELHHIAVSREGDLVTVEVQANAFLHHMVRNIVGSLLLVG
QGERPAGWLREVLDGRDRSRAGPTAPSAGLVFVGPRYPSHWQLPGEVTL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggaacgctgccggacccgatcggccctgactcccccgttcaaactgctgcg
gagaaccggtcgagccagcgtcgctgggtgctgggcgtggagtacgacggcggcagcttc
tccggatggcagcgactgaacaggcgcgacgagccggagcggcgcacggaacccaccgtg
caggcagcggtggagcaagccgtcagcatcgtcgcgggccggggcgttggcgtggtgtgc
gccggacgcaccgacgccggcgtgcatgccgcgacccaggtggtgcattttgatggcccc
gcgcagcgtgacccgcgtggctgggtactgggcaccaccagtaacctgccgccgtcggtg
tgcgtgaaatggtgcgtgcccacgagcgatgagttccacgcccggttttccgcccgtgcg
cggcgttaccgctacaccatcctcaatcgggcggttcggcctgccttgcagcaccagtac
ctgagctgggtgcgcaaagcgctggatgccgacgcgatgcatcaggcggcgcagcatctg
gtcggcgagcatgatttttccgcgttccggaccgtgcactgccaggcgccgcacgcgcgc
cgggagttgcaccacatcgccgtatcgcgcgagggcgatctcgtcacggtggaggtccag
gcgaacgccttcctccaccacatggtccgcaacatcgtcggcagcctgctgctggtgggg
cagggtgagcgtccggccggctggctgcgcgaggtcctggacgggcgtgatcgcagcagg
gccggccccacagcgccgtcggcgggtctggtgtttgtcggtccgcgctatccctcccac
tggcagctgccgggtgaagtcaccctgtga
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