Novilysobacter avium: INQ42_09245
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Entry
INQ42_09245 CDS
T08144
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lavi
Novilysobacter avium
Pathway
lavi03030
DNA replication
lavi03430
Mismatch repair
lavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
INQ42_09245 (dnaX)
03430 Mismatch repair
INQ42_09245 (dnaX)
03440 Homologous recombination
INQ42_09245 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lavi03032
]
INQ42_09245 (dnaX)
03400 DNA repair and recombination proteins [BR:
lavi03400
]
INQ42_09245 (dnaX)
Enzymes [BR:
lavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
INQ42_09245 (dnaX)
DNA replication proteins [BR:
lavi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
INQ42_09245 (dnaX)
DNA repair and recombination proteins [BR:
lavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
INQ42_09245 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_18
AAA_30
Mg_chelatase
AAA_7
nSTAND3
TsaE
AAA_2
AAA_19
PIF1
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QOW21441
LinkDB
All DBs
Position
complement(2054769..2056646)
Genome browser
AA seq
625 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALTNALDSGRVHHAFLFSGTRGVGKTTIARIFAK
SLNCEQGTSADPCGECNSCRDIDAGRFIDLLEIDAASNTGVDDVRDLIDNAQYMPSRGRV
KVYLIDEVHMLSKSAFNALLKTLEEPPGHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
EQIGGQVEKILQAEGIAVEPGAVRQISRAADGSLRDGLSLLDQAIAYTGGQLTDAAVATM
LGTVDQTRVGALLDALASGDGAALMAEVAALAEFSPDWAGVLEALSDALHRIQVRQLVPG
ASIEVDGVAIDTLAAKVPAELVQLWYQMAINGRRDLSLAPSQRAGFEMSVLRMLAFRPSG
PESARSGPASGGTGVTAGGIAGAGSASGPASASASAPESLLPATPRPAPTPTRARPPADT
GIADMPAEARPETTKAAGRSPESYHHDEREQAPFFSLEDESEAVAVATTAPEPTASVSEP
HPAPHAASDEVPAGAVIADADAWHAWVVASPLKGPARVLAEHVGFIACEGRVVRLGLSPQ
DELLNKPVLVAQIVKALATSLGGDPEIRFEASTVGGVSLRERNDKARDARRSAAVDSFMS
DPQVRALIAGGATVVADSIRPRGDA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtcctcgcccgcaagtggcgacccaagcgcttcgccgaactggtcggg
caggagcacgtggtccgcgccctgaccaacgcgctcgacagcggccgggtgcatcacgcg
ttcctgttttccggcacccgcggcgtgggcaagaccacgatcgcgcggatcttcgccaag
tcgctcaactgcgagcagggcacgtcggccgatccctgcggtgagtgcaattcgtgccgc
gacatcgacgcgggccggttcatcgacctgctggaaatcgacgccgcgtccaacaccggc
gtggatgatgtgcgcgatttgatcgacaacgcgcagtacatgccctcgcgcggccgggtg
aaggtctacctgatcgacgaagtgcacatgctctcgaagtcggcgttcaacgcgctgctg
aaaacgctggaggagccgcccggtcacgtgaagttcctgctcgccaccaccgacccgcag
aagctgccggtaacggtgctgtcgcgctgcctgcagttcaacctcaagcgcctggacgag
gagcagatcggcggccaggtggagaagatcctccaggccgagggcatcgcggtcgaaccc
ggcgcggtgcgccagatcagccgcgcggccgacggcagcctgcgcgacggcctgtcgctg
ctggaccaggcgatcgcctacaccggtggccagctcaccgacgcggcggtcgccacgatg
ctgggtacggtcgaccagacccgagtgggcgcgttgctggacgcgttggcgtccggtgat
ggcgccgcgctgatggcggaggtcgccgcgctggcggagttctcgcccgactgggccggc
gttctggaagcgctgagcgatgccctgcaccgcatccaggtgcgccagctggtgcccggg
gcaagcatcgaggtcgacggcgtggccatcgataccttggccgcgaaggtgcctgccgag
ctggtccagctgtggtaccagatggcgatcaatggccgtcgcgacctctcgctggcgccc
agccagcgcgccggcttcgagatgagcgtgctgcgcatgctggcgttccgtccctcgggg
ccggagtcggcccgcagtggtccggcgagtggcggcactggtgtgaccgcgggcggcatt
gccggagccggttccgcatcggggcctgcctcagcctcggcctccgcgcccgagtcgctg
ctgccggccacaccccgtcctgcgccaacgccaacgcgtgcgcgccctcccgctgatacg
ggcattgccgatatgcctgccgaagcgcgccccgaaaccacgaaagccgccggacggagc
ccggagtcctaccaccacgacgagcgcgagcaagccccgttcttcagcctggaggacgag
tcggaggccgtcgccgttgcgacgactgcgcccgagccgacagcatcggtcagcgagcca
cacccagccccgcacgctgcatccgatgaagtgcctgcaggagccgtcatcgccgatgcc
gacgcctggcacgcctgggtggtggccagtccgctgaagggaccggcgcgcgtgctcgcc
gagcacgtgggtttcatcgcctgcgaggggcgcgtggtgcgcctgggtctgtcgccgcaa
gacgagctgctcaacaagcccgttctggtggcgcagatcgtcaaggcgctggccacctcc
ctgggaggcgatccggaaatccgcttcgaagcgagcaccgttggcggcgtgtcactgcgc
gagcgcaacgacaaggcccgcgatgcgcgcaggagtgccgccgtggacagcttcatgtcc
gatccgcaggtgcgtgcgctgatcgccggcggcgccacggtggtggccgattcgatccgg
ccccgcggcgacgcctga
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