Novilysobacter avium: INQ42_09340
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Entry
INQ42_09340 CDS
T08144
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lavi
Novilysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lavi03032
]
INQ42_09340
03036 Chromosome and associated proteins [BR:
lavi03036
]
INQ42_09340
03400 DNA repair and recombination proteins [BR:
lavi03400
]
INQ42_09340
DNA replication proteins [BR:
lavi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
INQ42_09340
Chromosome and associated proteins [BR:
lavi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
INQ42_09340
DNA repair and recombination proteins [BR:
lavi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
INQ42_09340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
VWA_3
MvaT_DBD
Motif
Other DBs
NCBI-ProteinID:
QOW21453
LinkDB
All DBs
Position
complement(2068535..2068807)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTEFVNAVADAAELSKADASSAVDAMVSVITDALKKGDSITLVGFGTFQVRNRAARQG
RNPKTGETIQIKASNNPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactgaattcgtcaacgccgtcgccgatgccgcggagctttccaaggccgat
gcatccagcgcggttgacgcgatggtcagcgtgatcaccgatgcactgaagaagggcgac
tccatcacactcgtcggcttcggtacgttccaggtccgcaaccgtgccgcccgtcagggt
cgcaacccgaagaccggcgaaaccatccagatcaaggcgtcgaacaatcctgcgttcaag
gctggcaaagccctgaaggacgctgtaaactaa
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