Lysobacter avium: INQ42_09975
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Entry
INQ42_09975 CDS
T08144
Symbol
rsmH
Name
(GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
lavi
Lysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lavi03009
]
INQ42_09975 (rsmH)
Enzymes [BR:
lavi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
INQ42_09975 (rsmH)
Ribosome biogenesis [BR:
lavi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
INQ42_09975 (rsmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_5
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
QOW21564
LinkDB
All DBs
Position
complement(2208819..2209793)
Genome browser
AA seq
324 aa
AA seq
DB search
MMAGGVERAAPSGHLPVMYRQSLDGLQVNGKGTYLDGTFGRGGHARGVLDLLGPDGRLLL
MDKDPDAIAVAERDFGGDPRVSIFRGSFAAMVSWDAANAGLDGVFLDLGVSSPQLDVAER
GFSFSKDGPLDMRMDPDSGQSAAQWLASADDQEIADVLWTYGEERQSRRIARAIVARRAE
EPLVRTAQLAELIAAVMPRGKPGSDKSRIHPATRSFQAIRIFINRELADLEAGLDAALDC
LKVGGRLVVISFHSLEDRIVKQFINRHAKAPPSSRRLPVEIAFTPRLAAIGGAQKADYAE
TSVNPRSRSAVLRVAEKLAVPEAA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggtggcgtggagcgagcagcgccctccggccacctccccgtgatgtaccgg
cagtccttggacggtttgcaggtcaacgggaagggcacgtatctggacggcaccttcggt
cgcggcggccatgcgcgcggtgtgctcgacctgctcgggcccgacggccgcctgttactg
atggacaaggatcccgacgcgatcgcggtggccgagcgcgactttggcggcgacccgcgg
gtgtcgatcttccgcggcagcttcgccgcaatggtcagctgggatgcggccaacgccggt
ctggatggcgtgttccttgatctgggcgtgtcctcgccgcagctggacgtggccgagcgt
ggtttcagtttcagcaaggacggtccactggacatgcgcatggaccccgacagcgggcag
agtgccgcgcagtggctggccagcgccgatgaccaggagatcgccgatgtgctgtggacg
tatggcgaggagcgccagtcccggcgcatcgcccgcgccatcgtcgcccgccgcgccgag
gagccgctggtccgcaccgcgcaactggccgagctgatcgccgcggtgatgccgcgcggc
aagcccggctccgacaagagccggatccacccggccacccgcagcttccaggcgatccgc
attttcatcaaccgcgagctggccgatctggaagcgggtctggatgcggcgctggactgc
ctgaaggtcggcggccggctggtggtgatcagcttccattcgctggaagaccgcatcgtc
aagcagttcatcaaccgccatgccaaggcgccgccgtccagccgccggctgccggtggag
atcgccttcactccgcggctggccgccatcggcggcgcgcagaaggccgattacgccgag
acgtcggtgaacccgcgctcgcgctcggcggtgctgcgggtcgccgagaagctcgccgtg
ccggaggccgcatga
DBGET
integrated database retrieval system
