Novilysobacter avium: INQ42_12665
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Entry
INQ42_12665 CDS
T08144
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lavi
Novilysobacter avium
Pathway
lavi03030
DNA replication
lavi03430
Mismatch repair
lavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
INQ42_12665
03430 Mismatch repair
INQ42_12665
03440 Homologous recombination
INQ42_12665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lavi03032
]
INQ42_12665
03400 DNA repair and recombination proteins [BR:
lavi03400
]
INQ42_12665
Enzymes [BR:
lavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
INQ42_12665
DNA replication proteins [BR:
lavi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
INQ42_12665
DNA repair and recombination proteins [BR:
lavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
INQ42_12665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QOW22032
UniProt:
A0A7S6UKL7
LinkDB
All DBs
Position
2817960..2818802
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AA seq
280 aa
AA seq
DB search
MRFLVVDCETTGLEDVDEPITIGAILCDFSASRDGEVIETYYSEQQPSRPISIQAMATHG
IYDEDLAGKAFDLARFNQLVESADVIIAHNARFDARMLFKVSPQIIGKNWRCTFNQITYP
SELNRESLDYLCLQCKVERRNPHNALNDCESLLGVLNTRLGKTKRSNTHLGRVLAEPEWR
VFSRRNPMLRLESTDGIVFSEINEPRILECAETSPIQLWTKDHLDFVVGYFRYGHYHGRQ
GELFRFRKVDNPHIACATDEALDYMVKKFTDASVIIGPSG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcctagttgttgattgcgaaacgacggggctcgaagatgtcgatgagcccatc
acaatcggcgcgatcttgtgcgatttttccgcgtctagagatggcgaggtgatcgagacg
tattactcggagcagcagccatcacgcccaatctcaatccaggcgatggcaacgcacggc
atttatgatgaagacttggcgggaaaagccttcgacctagcacgttttaaccagctagtg
gaaagcgctgacgtgataattgctcacaacgcccgctttgatgcaagaatgcttttcaaa
gtttcgcctcaaattattggcaagaactggcgctgtacgtttaatcaaattacctatcca
agcgaactcaatcgagagagtctcgattatttatgccttcaatgcaaagtggagcgccgc
aatccacataatgcactcaatgactgcgaaagtttgctcggcgtcctaaacacaaggctc
ggaaagaccaagcggagtaacactcatctcggccgagtccttgcagaaccagagtggcga
gtgttctcgcggcgaaatccaatgctacggctcgagagcaccgacgggattgttttttcg
gagataaatgagccgcgtatactcgaatgcgctgagacctcgcctatacaactatggacc
aaagatcacttggactttgtggtcggctacttccgctacggccattatcacggaagacaa
ggcgagctctttcggtttagaaaagtggataacccgcacatcgcttgcgctacggacgag
gctctggactacatggtcaagaagttcactgacgcgtctgtgattatcgggccaagcggc
taa
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