Lactobacillus sp. wkB8: LACWKB8_0366
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Entry
LACWKB8_0366 CDS
T03355
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
law
Lactobacillus sp. wkB8
Pathway
law03030
DNA replication
law03430
Mismatch repair
law03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
law00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACWKB8_0366
03430 Mismatch repair
LACWKB8_0366
03440 Homologous recombination
LACWKB8_0366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
law03032
]
LACWKB8_0366
03400 DNA repair and recombination proteins [BR:
law03400
]
LACWKB8_0366
Enzymes [BR:
law01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACWKB8_0366
DNA replication proteins [BR:
law03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LACWKB8_0366
DNA repair and recombination proteins [BR:
law03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LACWKB8_0366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
AIS08682
LinkDB
All DBs
Position
372154..373107
Genome browser
AA seq
317 aa
AA seq
DB search
MSIYVKNGVLHVSGVQDKIRGKGQEWPDFIADYTMLDIETTGLNPYRDHVTEMGAVKVRN
NKVVDEFSQLVVYPRSNHVPSFITKLNGITEELLLKEGKPVKEVMTAFRSFIGDDIIIGY
NVNFDLNFLYDLAQKFHLPELNNDYVDVLRLARVYYPKQHNRLLDCIQRAGIAQVEQHHG
LDDSLDTKKVYDDFRQHFTPELLEKAQGKLKNFDLLQDELDTWELGFRNPVNNKKIAFAP
EVEIDAVEAAQMVNNMNGIAQTGVKADTDYLIMSDDGFFSKSNAEALKAKEFNRAGSKIK
RLSESYFLNMLDEWARS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttacgtaaaaaatggcgtgctgcatgtttctggcgttcaagataaaataagg
ggcaaagggcaggaatggcctgattttattgcagactataccatgcttgatattgaaacc
acaggcttaaacccatatcgcgatcatgtgaccgaaatgggcgcagttaaagtacgtaac
aataaggtcgtggatgaatttagccagttagtagtttatccgcgttcaaaccacgttccc
agttttatcaccaagctaaacggtattactgaagaactgctgcttaaagaaggaaagccc
gtaaaagaagtaatgacggcttttcgcagttttattggtgatgatattatcattggttac
aatgtcaattttgacttaaatttcctatatgatttggcacaaaagtttcatttgcctgaa
ctaaataatgactatgttgatgttttgcgtctagctcgcgtttattatcccaagcagcat
aaccgcttgcttgactgtattcaacgcgcgggtattgcccaagtagagcagcatcatggt
ctggatgattctcttgatactaaaaaagtttatgatgattttcgccagcattttacaccc
gaacttttagaaaaagcacaaggcaaactaaaaaactttgatttattacaagatgaactt
gatacttgggaattgggctttcgtaacccggttaacaataagaagattgcttttgctccc
gaagtagaaatagatgctgttgaagctgcgcaaatggttaataacatgaatgggattgcg
caaactggggttaaagcggatactgattatttaattatgagcgatgatggcttttttagt
aaaagcaatgcggaagctctcaaagcgaaagaatttaatcgcgctggtagtaaaattaag
cgtctgtctgaaagctatttcttaaatatgcttgatgaatgggctaggagttaa
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