Lactobacillus sp. wkB8: LACWKB8_0576
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Entry
LACWKB8_0576 CDS
T03355
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
law
Lactobacillus sp. wkB8
Brite
KEGG Orthology (KO) [BR:
law00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
law03009
]
LACWKB8_0576
Enzymes [BR:
law01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LACWKB8_0576
Ribosome biogenesis [BR:
law03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LACWKB8_0576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
Methyltransf_15
Methyltransf_31
RrnaAD
TRM5-TYW2_MTfase
MTS
DOT1
PrmA
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AIS08851
LinkDB
All DBs
Position
554919..556271
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AA seq
450 aa
AA seq
DB search
MEKNQIIKLEITDLSYEAMGVAHYEGMTVFVNNALPGETVEAKILKVKKSFAFAKIEQII
KESPDRVNIKLNQWVQTGLASLAHVKYDKQLEFKRNQVVNLLQKAHLDDVKVGDTLPSPE
QTGYRNKAQVPVREVKGQLEIGFFRKHSHDLVPLTNFFTTDPEIDRVLVAVRDVLRQYRV
PAYDEIHNQGEVRYLDVRRSKATGEIMVILVCLHKDFPQLTKVAEAIKQIEGVTSLVLNY
NPKKTNVILGKVDYLIFGKPQITDQIGDVKFKISPESFFQINSLQTPRLYDLAIKKADLQ
PDDIVIDAYSGIGTIGLSVAKHVKSVRGIESVSDAVKDANNNAKLNGISNAKYVTGKAEE
VLPRWAAKGMKADVIFVDPPRKGLTPEFIEAAVKTSPKKIVYISCNPATMIRDLQEFMNE
GYTFNQIDPVDMFPQTPHVEAVTVLERTGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatcaaattattaagttagaaattaccgatttatcttatgaggcaatgggt
gtggctcattatgaagggatgacggtatttgtcaacaatgctttaccgggagaaacggta
gaagccaagatcttaaaagtcaaaaagagttttgcttttgctaaaatcgagcaaatcatt
aaggaaagtcctgaccgggttaatattaagctcaaccagtgggttcaaactggcttggca
tctttagcacacgttaaatacgataagcagctggaatttaaacgtaatcaagtagtaaat
ttactgcaaaaagcacatttagatgatgtaaaagtgggcgataccttgcctagtccagaa
caaactggctaccgtaacaaggcacaagtgcctgttcgtgaagttaagggccagcttgaa
attggctttttcagaaaacactcacatgatttagtgccactgaccaatttctttacgact
gatcctgaaattgaccgcgttttagttgcagttagggatgtattgcgtcagtaccgcgta
cctgcatacgatgaaattcataatcagggtgaggtgcggtatttagatgtccgtcgaagt
aaggctaccggtgaaatcatggtcatcttggtttgcctgcacaaggattttccgcaatta
actaaagtggctgaggcaattaagcaaattgaaggcgtaactagtttggtcttgaactat
aacccgaagaagaccaacgttatcttaggtaaagttgattacttaatcttcggtaagcca
caaattacagatcaaattggtgatgtgaagtttaagatttcccctgaaagtttctttcaa
attaattcattgcaaacaccccgcttatatgatttagctattaaaaaagctgatttacag
cctgatgatattgtgattgatgcttattccggtattggaactattggtttaagcgttgcc
aagcacgttaaatctgtccgtggaattgaaagtgtgtctgacgcggtgaaagatgccaat
aataatgctaagttgaatggtatcagtaatgccaaatatgtgactggtaaggctgaagaa
gtgctgccaagatgggctgctaaggggatgaaagctgatgtcatctttgtcgacccaccc
cgcaaaggattaacgccagaatttattgaagcagcagtaaaaactagtccaaagaagatt
gtttatatctcatgcaatcccgcaaccatgattcgtgacctgcaggaatttatgaatgaa
ggttacacctttaatcaaatcgatcctgttgacatgtttccgcaaacaccgcatgttgag
gcggtcacggtgctggaacggacaggtaaataa
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