Lactobacillus sp. wkB8: LACWKB8_0669
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Entry
LACWKB8_0669 CDS
T03355
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
law
Lactobacillus sp. wkB8
Pathway
law03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
law00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LACWKB8_0669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
law03400
]
LACWKB8_0669
DNA repair and recombination proteins [BR:
law03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LACWKB8_0669
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LACWKB8_0669
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_23
AAA_29
nSTAND3
nSTAND1
AAA_22
AAA_21
AAA_33
DnaJ_CXXCXGXG
AAA_15
APS_kinase
AAA_18
AAA_14
SLFN-g3_helicase
RNA_helicase
ATPase_2
NACHT
cobW
Viral_helicase1
Mtrc-MtrF_II-IV_dom
AAA_24
MMR_HSR1
T2SSE
DUF1924
NTPase_1
DUF87
Septin
Aq_aa27
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AIS08943
LinkDB
All DBs
Position
650620..653472
Genome browser
AA seq
950 aa
AA seq
DB search
MVNDKIVIRGAREHNLKDINLSIPKDKLVVITGLSGSGKSSLAFDTLYAEGRRRYVQSLS
SYARQFLGQMDKPDVDSIDGLNPAISIDQKTTSHNPRSTVGTVTEINDYLRLLWARVGHP
VCPNDGTLIERQSVEQMVNRILALPERSRIQILAPVIRSKRGAHKEVFKRVQRAGYVRVI
VDGEMHEIGEKFDLEKNKRHSIDIVVDRLIVKDGIRSRLFDSVEAALRLSDGYMNVDVIG
GDLISFSEYYACPKCGFTVGEMEPRLFSFNAPFGACPDCDGLGVKLAVDEDLVVPDKSKT
LAEGAIAPWKNSKYYGEMLEQACSALKIPLDKPFSKLTKKQRETILHGSTRKIKFHVTGD
FGVNDTTAPFEGAMENVERRYYHPMSKFMRDVMGKYMTELTCSTCHGKRLNRKALAVRVN
GKDIAEASELAISHALEFFTDIKLDEQETIIAKPILKEVRDRLTFLNSVGLDYLTLSRSA
NTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNDRLIAALKRMRDLGNSLIVV
EHDDETMRQADYLIDMGPGAGTYGGEIMAAGTPSEVEQNEKSLTGQYMAGKKFVPVPLKR
RKGNGKNIIVTGAAENNLKNLKVEFPLGKLIVVTGVSGSGKSTLVNMILKRALAQKINRN
QTKPGKYKTISGYQNIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRALFAQTNEAKLRGY
TKARFSFNVKGGRCEACHGDGIIKIEMNFLPDVYVPCEVCHGSRYNSETLEVSYRKKNIA
QVLDMTISEACSFFKNIPKIARKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAAELQK
LSTGKNFYILDEPTTGLHTDDIKRLLEVLQRLVDQGNTVLIIEHNLDVIKNADWLIDLGP
EGGEGGGQIVATGTPEQVAQVKESYTGQYLKPVLKRDTALTKKASQKTGK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgataagattgttattcggggtgcacgtgaacataatttaaaagatattaac
ctttctatccctaaggataaattggttgtgattacgggtttatctggttctggcaaaagt
tctttagcctttgatacattatatgctgaagggcgcagaagatacgttcagtccttatca
agttatgcccgccaatttttaggacaaatggataaacctgacgttgattcgattgatggc
cttaatcctgcaatttcaattgatcaaaaaactacttcccataacccgcgttcaactgtt
ggtactgttactgaaataaacgattatctcagacttttgtgggcgagagtagggcatcct
gtgtgtcctaatgatggtactctaattgaacgtcaatctgtagaacaaatggttaaccgc
attttggcattgcctgaaagaagccgtattcaaattttagcaccggtaatcaggtctaaa
cgtggtgcgcacaaagaagtatttaaacgcgtacaacgtgctggctacgtgcgcgtcatc
gttgatggtgaaatgcacgagattggtgaaaaatttgatttagaaaaaaataagcgccat
tcaatcgacattgtggttgatcgtttgatcgtcaaagatggtatccgctcgcgacttttt
gattcagtagaagctgctctacgtctatcagatggctacatgaatgttgatgttattggc
ggcgatttaatcagcttttcagagtattatgcttgccctaaatgtggttttaccgtggga
gagatggagcccaggctattttcctttaatgcaccatttggtgcttgccctgactgtgat
ggtttaggtgttaaattagctgttgatgaagatttagtagtgcccgataaaagcaaaact
ttagctgaaggagcaattgcaccctggaagaattccaagtattacggggaaatgctagag
caggcatgtagtgctttaaaaataccacttgataagccatttagtaaactgactaaaaag
caaagagaaacaattttgcatggttctactaggaaaattaagtttcacgttactggtgat
tttggagtcaatgatactaccgcaccctttgaaggtgctatggaaaatgtagaaagacgt
tattatcatcccatgtcaaaatttatgcgggatgtaatgggcaagtacatgaccgaactc
acttgttcaacctgtcatggcaaaaggttaaatcgtaaagcattagcagttagagtaaac
ggtaaggatatcgctgaagcgtccgaattggcaattagtcatgctctggaatttttcact
gatattaagttagatgagcaagagactataattgctaagccgattttaaaagaagtacgt
gatagattaactttcttgaatagtgtggggttagactacctgacattgtcacgttcagct
aataccttatctggtggtgaagcacaaagaataaggcttgcgacccaaattggttctaat
ctttcaggagtaatgtacgttttagatgagccttcaattggtttgcatcaacgcgataat
gacaggttgattgctgctttaaaacggatgcgtgatttaggcaactcgttaattgtcgtt
gaacacgatgatgaaacaatgaggcaagctgattatttaattgacatgggaccaggcgct
ggaacttatggcggcgagattatggctgccggcactccatcagaagttgaacagaatgaa
aagtcactgactggacaatacatggccggtaaaaaatttgtccctgtacctttaaaaaga
cgcaagggtaatggtaaaaacatcattgttacgggtgcagccgagaataatcttaaaaac
ctcaaggttgagtttcctttagggaagttaattgtggttacaggagtctccggttctggt
aaatcaactttggtaaacatgattttaaagcgggctctagcccaaaaaataaaccgcaac
caaactaaaccgggtaaatataagacgatcagcggttatcaaaacatcgaaaagattatt
gatattgatcaaagcccgattgggcgtacgcctcgtagtaaccctgctacttataccagc
gttttcgatgacatcagagctttatttgctcaaactaacgaagctaagctccgtggctac
actaaggcgcgtttttcatttaacgttaagggtggacgttgtgaagcttgtcatggagat
ggcattatcaaaattgaaatgaacttcttaccggatgtttatgttccttgtgaagtttgt
catggcagccgctacaattctgaaactttagaagtttcctatcgtaagaaaaatattgcg
caagtgctggatatgactatcagtgaggcctgctcattttttaagaatattcctaaaatt
gcgcgcaagttgcaaacaattgttgatgtggggcttggctatgtcaagctcggacagtca
gctactaccttgtctggtggtgaagcgcaaagaatgaaactggccgctgaactgcaaaaa
ttgtcaactggcaagaatttctatattctggatgaaccaacgaccggactacatactgat
gacatcaagcgactgctagaagttttacaaagattagttgatcaaggtaatacggtttta
ataattgaacacaatcttgacgtgattaaaaatgctgattggttaattgatttgggtcct
gaaggcggcgaaggcggcggtcaaattgttgctacaggcacacctgaacaggtagcacaa
gttaaggaaagctatactgggcaatacttgaagccagtgcttaagcgggacacagcttta
acaaaaaaggccagccaaaaaacaggcaaatag
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