Lactobacillus sp. wkB8: LACWKB8_0891
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Entry
LACWKB8_0891 CDS
T03355
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
law
Lactobacillus sp. wkB8
Pathway
law03030
DNA replication
law03430
Mismatch repair
law03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
law00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACWKB8_0891
03430 Mismatch repair
LACWKB8_0891
03440 Homologous recombination
LACWKB8_0891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
law03032
]
LACWKB8_0891
03400 DNA repair and recombination proteins [BR:
law03400
]
LACWKB8_0891
Enzymes [BR:
law01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACWKB8_0891
DNA replication proteins [BR:
law03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LACWKB8_0891
DNA repair and recombination proteins [BR:
law03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LACWKB8_0891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIS09162
LinkDB
All DBs
Position
915007..918135
Genome browser
AA seq
1042 aa
AA seq
DB search
MKYAALQNLSAFTLLESPIKIKNLLNTAKNLGYDAVGLTDINVTYGLVNFYEVAQEVGIK
PLLGMQLRLNGLIDSAHKYNLIAFAKTDEGYRNILRLSSRINLLTENGTNDKILTLENLT
KDLNELIFITPANTHSELLNLQLQNENLGTDFIRHLISLVPKTSSLYLGVYGGNSQENYI
QYVTQIAKQFDLPLVSVEDTCYLKPQDQFLRKTLQAIKKGAVMQDISELAKQKGSHYLPS
VQEISDRYHELNLDDALNNTGKIADACAAKVVFQTPVLPKYKQDQFANSKDYLNSLAQQG
LQDRFHGHKIPLNYQKQLDYELQVIDQMGFNDYFLIVWDVVNYCHRSDIVMGPGRGSACG
SLVSYSLRITEVDPIQYKLLFERFLNPARHEMPDIDLDIPDNRRDDVIKYMFTKYGMDHA
AQILTFGTLSAKQVLRDTGRVFGLQEMQMSKWSNSVPFSKGKITLQEAYQGSKKMQMLVN
ASAQNKLLFETANGLEGLPRHYSIHAAGLVLSDNSIAAIAGLQSGQLGIPITQQTKKYVE
SLGLLKIDFLGLRNLTILGDTEKLIRTQGKKIDFNKIPLNDPQTLAIFQKGETELVFQFE
SSGIRNVLRELHPDNFEDLVAVNALYRPGPMQNIKTFIARKKGKQKVAYPDPSLKPILAS
TYGVLVYQEQVMQTAQVLAGFSLGEADILRRAMSKKDQSVIEKEKSRFISGAVKKGKTKQ
VAAKVYNYIEQFANYGFNRSHAVAYTMIAFWLAYLQVHYPAEFYAAMLNSNTGNQNKLIE
YVMKAQGDGVKILSPDINKSTLNYQVIDGKILVSLRAIKGIRIDFLKEIVKKRQNGKFKS
LSDFLRKIDPKFIQTKVIQSMIKAGCFDQLNSNRNELLQNSTEIVENVKLTQGNLALAES
LGGAPIEPAKAPSKQEKARMEEEALGFSTLTSPLLAVQKYAQKFNARPLSDFEIHESGIT
VGKLLNLKLIRTKNGQTMAFGSFADSSSKQDIVIFPNVYDKIQSNLKEGGIYLLGIKIQN
DRIDSSKKQYVLTNLKVVNFKE
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgctgctctgcaaaatcttagtgctttcacgcttttagaaagtcctataaag
atcaaaaatttattgaataccgctaaaaatttgggctatgatgccgtagggctaacggat
attaatgtcacatacggtctagttaacttttacgaagtagcacaagaggtcggtattaag
ccacttttagggatgcagttgagacttaatggactaattgatagtgcgcataaatataat
ttaatagcatttgctaaaacagatgaaggataccgcaatattttacgattatcaagtagg
atcaatctgctaactgaaaatggtactaatgacaaaatcctgactctagaaaacttaact
aaagatttaaatgaactgatttttatcacacctgcaaatacacatagtgagttacttaat
ttgcagctgcagaatgaaaacttgggcactgatttcatccggcatttaattagtttggtg
ccaaaaaccagttcactatatttaggcgtttacggcggcaattcacaagaaaattatatt
caatacgtcacgcagattgctaagcagtttgacttgccccttgttagtgttgaagacaca
tgctacttgaaaccgcaggatcaatttttacgcaagactttacaagctattaaaaaaggc
gctgtaatgcaggatatttctgagttggcaaaacaaaaaggctcacattacttgccttca
gttcaggaaataagtgaccgttatcatgagcttaatttggatgatgctctaaataatacg
ggcaagatcgctgatgcttgtgctgccaaagttgtttttcaaacacctgttttgcctaaa
tacaaacaggatcagtttgctaactcaaaggattatcttaattctttagctcaacaaggt
ctacaggaccgttttcatgggcataaaataccgctaaactatcaaaagcagctggactac
gagctgcaggttattgaccaaatgggctttaacgattactttttgatagtttgggatgtg
gtaaattattgtcaccgctctgatatagtcatggggccgggacgcggctctgcctgtggc
tccttagtttcgtattcactgcgcatcacggaagttgaccctatacaatataaattactg
tttgaacggtttttaaatccggcaagacacgaaatgccagatattgatttagacatacct
gataatcgcagagacgatgtcatcaaatacatgttcactaaatacggcatggaccatgcg
gcacaaattcttaccttcggtactctgtccgctaaacaagttttgcgggatacgggacgc
gtttttggcttgcaagaaatgcaaatgagcaaatggtcaaacagcgtacctttttctaaa
ggtaaaatcactttgcaagaagcatatcagggctcaaagaaaatgcaaatgctagtgaat
gccagtgcgcaaaataagctgctctttgaaacggcaaatggtttggaaggattaccgcgg
cactattctattcatgcagccggtctagtccttagtgataattctattgccgcgattgct
ggtttacaatctggtcagttgggcatacctatcactcagcaaacaaagaaatatgtcgaa
tctctaggattattaaaaatagattttttaggtctcagaaatcttacaattttaggggat
acggaaaaattaatacgaacacaaggtaaaaaaatcgattttaataaaatacctttaaat
gatcctcaaactttagcaattttccaaaaaggggaaaccgagctggtttttcagtttgaa
tcaagcgggatcagaaatgtattgcgtgaattacatcccgacaactttgaagatttagtt
gctgttaacgctctttacaggccaggcccaatgcaaaatatcaagacttttatagctaga
aaaaaaggcaagcagaaagtagcgtatccagatccaagtttaaaaccaattttggcttca
acctatggcgttttagtgtaccaggagcaagtaatgcaaacggctcaagttttagcaggt
ttctctttgggtgaagccgatatcttgagacgagcaatgtcaaaaaaggaccagagcgtt
attgagaaagaaaaatcgcgctttatttccggtgctgtcaaaaaaggcaaaactaaacaa
gtagcggccaaggtttataactatattgaacaatttgcaaattatggttttaaccgctcc
catgctgtggcctacacaatgatcgctttttggttagcatatttgcaagttcattatcct
gctgaattttatgcggctatgcttaattcaaatactggtaaccaaaataagctaattgaa
tatgtaatgaaggcacaaggtgacggggtaaaaatcctgtcccctgatattaacaagagc
accttaaattatcaggtgattgacggtaaaattttagtcagcttgcgggcaattaagggt
attaggattgactttctgaaagaaatagtcaaaaaaagacagaatggtaaatttaagtct
ttgagtgattttttgcgaaaaattgatcccaagttcattcaaaccaaagtaatacaatca
atgattaaagctggctgttttgatcaacttaactctaatagaaatgagttgttacaaaat
agtacggaaatagttgaaaacgtcaagttaacgcagggaaatctcgcacttgctgagagt
ttaggcggagcacctattgagccggctaaagcaccatctaaacaggaaaaggcccgcatg
gaagaagaagccctgggtttttccactttaacttcgccattattagcggtacaaaaatat
gcgcaaaaatttaatgccagacctttaagtgattttgaaatccacgagtcaggcataaca
gtggggaagctgttaaatttaaaattaattagaaccaaaaatgggcaaaccatggcgttt
ggtagctttgcggattcaagcagcaagcaggatattgttatttttcctaatgtttatgat
aaaattcaatcgaatttaaaggaaggtggaatttacttattaggtattaaaatacagaat
gaccgtattgattccagtaaaaaacagtatgtattgacaaatttaaaggttgtcaacttc
aaagagtga
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