Lactobacillus sp. wkB8: LACWKB8_0954
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Entry
LACWKB8_0954 CDS
T03355
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
law
Lactobacillus sp. wkB8
Brite
KEGG Orthology (KO) [BR:
law00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
law03400
]
LACWKB8_0954
Enzymes [BR:
law01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LACWKB8_0954
DNA repair and recombination proteins [BR:
law03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LACWKB8_0954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PDDEXK_1
AAA_12
ResIII
AAA_30
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AIS09225
LinkDB
All DBs
Position
complement(985039..988665)
Genome browser
AA seq
1208 aa
AA seq
DB search
MAKNTTEPPFTDIQRKAIEDDNRDILVSASAGSGKTTVLVYRLLRAILNGTNIDQLLVVT
FTKAAAAEMKKRIKDLLLVEYRNGNTKVNFRQQLNLIDSANISTVDAFCLDVIHRFYYVV
GIDPSFSVLTDDTQAELMRERALKEIESEFLTEKDTGFIAFYDNFAGDRDAQTPQNLLLD
LYNYAMAKPDYREWLKQLPQKYQIDQSVVTSAIWQKEIKPYLITLFDDLKDKIDQLLQSA
IMNTKEFGKVKEAFTLFNECLAGYLDSLKHDFAYDDQRAKLRACIFRKNIRRSSKWDEDL
VAFYEECINLKNEAGDQIFTTFTSFYASEEKEQINLLQKGSQIMAAITKAELALIDRFEE
LKRAQNLLDFSDMEQLAYRILSQDTSASAMARKFYQDKFSEILVDEYQDINPLQEKILQL
IKKDGHNNMFMVGDVKQSIYGFRQAEPSLFLHKYQEAARQENAAKEERILLSDNFRSTKP
VINFVNKVFANILTPDFGGIDYAKEGQLKYGSKNQPENLADATEILLHDKSKETDNTQNE
NEKDIDSAEIAMVINRIKQFKKENLLVYDQHSQEPNKLRPFKYSDIVILTRSRSNNLEIM
QEFAKNNIPIMVTDAKNYFQTLELTIILNYLRIIDNPDQDIPLVAVLRSPLFNFKEPDLS
RIRIHTPNASFYSALAAYVAVGDQLSQRIKDFLNQLEELRQFATTHRISELVWSIYEKTS
LLEIMTSLPNGKQRRINLEALYERASSYESAGFKGLYQFINFIERMRRSQKDLAQPLLTK
EAGNSVRLMTVHGSKGLEFPIVFYLGLEHRFQLRDLSNNYIISSDSVGLTIRCKHYRADT
LIKAFDNVAKRRQLLEEEARILYVGMTRAKQKLILVADINDLQKTFQKWQNPLSLNSKLN
STNPMDLIGPSIKFDELIAQKVSDINFASETGQDLLYIDYQGETINVTETQVQEQADTEN
SYLLSRIKDLYGLDYPFKDASKTTAYQSVSEIKKAFNDPLDNELENAHLLSSTNRYLQPI
DTKPNFLFKTKFTGAEIGTAMHLILQYYDYHGQGKPQQVEEEVQQLVKQNKLNSNLVSSL
DLNQINWFVHSDFAAKFWQQPQNLKREIEFSSLLPASILFEHFDDPNAKILIHGTIDGYF
IEKDGIILFDYKTDHIDPTHLDLAINNIKQKYRGQLRLYERALNSFADVKVKSKYLILLD
AQKVVEVK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatactactgagcccccatttactgatattcaaagaaaagctattgaagat
gacaaccgagatattttagtgtctgcgtctgccggcagtggtaaaactactgttttagta
taccgcttgttaagagcaatattgaacggcaccaatattgaccagcttttggttgttact
ttcaccaaggcagccgccgcagaaatgaaaaagcgcattaaagacttgcttttagtagaa
taccgcaatggcaacaccaaggttaatttccgccagcaactaaatctaattgattcggcc
aacatttctactgttgacgcattctgtttagacgtgattcatcggttctattacgttgtc
ggcattgatcccagtttcagcgttttaacagatgacactcaggcggaattaatgcgagag
cgggcattaaaagaaatcgaaagtgagtttttaacagaaaaagatactggttttattgct
ttttatgacaatttcgctggcgacagggatgcccaaacacctcaaaatctattattagat
ttatataattacgccatggccaagcccgattaccgtgagtggctaaagcaattgcctcaa
aaatatcaaattgaccaaagcgtagtgacatcagctatttggcaaaaagaaatcaagccg
tatttgattacgctatttgatgatttaaaagataagatagaccaattattgcaaagcgca
atcatgaatactaaagaatttggcaaagtaaaagaagcctttactttgtttaatgagtgc
ttagccggttatttagatagcctcaaacatgactttgcttatgatgatcagagagcaaaa
ttgcgtgcttgtatttttagaaaaaatatacgtaggtccagtaaatgggatgaggatctc
gttgctttttatgaagaatgcattaatttaaaaaatgaagcaggagatcaaatttttacg
acatttacttcattctatgctagtgaagaaaaagaacaaattaatctcttgcaaaagggc
tctcagataatggcggcaattacaaaagctgaattggctttaatagaccgttttgaagaa
ctaaaaagagcacagaatttacttgattttagtgatatggaacagttagcgtatcgcata
ttgagtcaagatacttctgcttcggcaatggcccgcaaattttatcaagataaatttagc
gagattttagttgatgaatatcaagatattaatcccttacaagaaaagatactgcaatta
attaaaaaagacggtcacaacaacatgtttatggtgggggatgttaaacaatcgatttat
ggcttcaggcaggctgaaccaagcttgtttttacataaatatcaagaagctgcccgtcaa
gaaaatgctgcaaaagaggaacgaattcttttatccgataatttccgctcgactaaaccc
gttattaattttgttaataaggtttttgccaacattttgacccctgattttggtggtatt
gactatgctaaagaagggcaattaaagtatggttccaagaaccagcccgaaaatttggcg
gacgccactgaaatacttcttcatgataaaagtaaagagactgataatactcaaaatgag
aatgagaaagacattgattcagcagaaatcgcaatggtcattaaccgcattaaacaattt
aaaaaagaaaacttgctagtttatgaccaacattctcaagaaccaaacaaactccgtcct
tttaaatatagcgatattgtgatcttaaccaggagccggagcaataatcttgaaattatg
caggagtttgctaaaaataatattcccatcatggtcacagacgctaaaaattattttcaa
acattggaattaactattattttaaattacctgcggattattgataatcctgatcaagat
ataccgttggtagctgttttaaggtcgcctctttttaactttaaagaacctgatttaagc
cgaattagaattcatacgccaaatgccagtttttatagtgcgttggcagcttacgttgca
gtcggtgatcaactaagtcaaagaataaaggactttttaaatcaactggaagaattgcgc
caatttgcgacaacacatagaatttctgaattggtgtggagtatttatgaaaaaaccagc
cttttggaaattatgacgtctttgccaaatggcaagcaacgcagaattaatctcgaagct
ttgtatgaaagagcgtcttcttatgagagcgccggctttaaaggcttatatcaatttatc
aatttcattgagcgcatgagacgcagccaaaaagatttagcccagcccttattaactaaa
gaagctggtaattccgtccgtcttatgacagttcacggctctaaagggttagaatttcca
atagttttttatcttggactagaacaccggtttcagctgcgtgacctaagcaataattat
attatcagctctgattcagttggtttaactattagatgtaagcattatcgtgccgatact
ttaattaaagcatttgataacgtcgccaaaagaaggcagctcctagaagaagaagcgcgg
attttgtatgtaggaatgacccgcgcaaagcaaaaactaatattggtagcagatatcaat
gatttgcagaaaacatttcaaaaatggcaaaacccactttctcttaatagtaagctaaat
tccacaaacccaatggatctaattggaccatctattaaatttgacgaattgatcgcacaa
aaagtttctgatattaattttgcctctgaaactggtcaggatttgttatacattgactat
caaggtgaaacaataaatgtgacggaaactcaggttcaagaacaagcagatacagaaaac
tcttatttactatcaagaattaaagatttgtatgggcttgattatccttttaaggatgca
agtaaaacaacagcctaccaatcagtttctgaaataaaaaaggcttttaatgatccgctt
gacaatgaacttgaaaatgcccacttactctcatcaacaaataggtatttgcaaccgatt
gataccaagcctaattttttattcaaaactaagtttactggtgctgaaattggtacggca
atgcacctaattttgcaatattatgactatcatggtcagggaaagccgcagcaagttgaa
gaagaagttcaacaactagttaagcaaaacaaattgaacagtaatctagtttcaagtctt
gacctgaaccaaattaattggtttgttcacagtgattttgctgccaagttttggcaacaa
ccacaaaatttaaaacgtgaaattgaattttccagtttattgcctgctagtattcttttt
gagcattttgacgatccaaatgctaaaattttaattcacggaacaattgatggttacttt
attgaaaaagatggcataatattattcgattataaaactgaccacattgatcctacacat
ttagatctggcaatcaataatattaagcagaaataccgggggcagttgcgcctttatgaa
agggcattgaattcctttgctgatgtcaaagttaaaagcaaatatttgattttattagat
gctcaaaaagttgtagaagtgaaatag
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