Lactobacillus sp. wkB8: LACWKB8_1272
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Entry
LACWKB8_1272 CDS
T03355
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
law
Lactobacillus sp. wkB8
Brite
KEGG Orthology (KO) [BR:
law00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
law03019
]
LACWKB8_1272
03009 Ribosome biogenesis [BR:
law03009
]
LACWKB8_1272
Enzymes [BR:
law01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LACWKB8_1272
Messenger RNA biogenesis [BR:
law03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LACWKB8_1272
Ribosome biogenesis [BR:
law03009
]
Prokaryotic type
rRNA helicases
LACWKB8_1272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AIS09530
LinkDB
All DBs
Position
complement(1315137..1316498)
Genome browser
AA seq
453 aa
AA seq
DB search
MNNIFENEQLNPAIRQGLKKINFVKPTKVQEKVIPVLLAHKNVVVQAVTGSGKTHAFLLP
VMNEIDTNLQYPQAILTTPSRELAQQLYQVTRQLRDAAGLNISVAHLAGGTDRERQIEKI
NRRKPQLIIATPGRLHDFVEKKVLPLDYVKNFVIDEADMTLDMGFLSDIDFIAQRLMRDC
VLAAFSATIPVKLANFLRKYMAKPETIIIDNPAVISPTVKNDLIDIGAKKREKVLYQVLT
LGQPYLALIFANTKQTVDELAAFLTNQGLKVAKIHGGITERERKRTLREVEAGQYQYVVA
TDLAARGLDIKGVSLVVNYEIPRELEFVVHRIGRTGRNGMSGHAITLIREEEMDRILKLE
RMGIQFDFVEVKNGALVPRKHYHSRNSRQSAAHSLDNKMRGMVNKAKKKRKPGYKKKIKR
AIQQDKAQKNKIEQRNKIRKAKRQRKRRREDQS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatttttgaaaacgaacagttaaatccagcaattaggcaaggtttaaaaaag
atcaattttgttaaaccgacaaaagttcaggaaaaagtaattcccgttttattggcacat
aaaaatgtggtggtacaggctgtcactggatctggtaaaactcacgcttttttgcttccg
gtaatgaacgaaattgacacaaacttgcaatatccccaggcaattttaacaacacctagc
cgtgaacttgcacagcaattgtatcaagtgaccaggcagttgcgggatgcagcaggattg
aatatttctgttgcgcatttagctggcggaactgaccgtgaaaggcagatagaaaaaatt
aaccgccgcaaacctcaactcattattgctactccaggacgtctgcatgattttgtcgaa
aaaaaggttttaccgttagattatgttaaaaattttgtcattgatgaagctgatatgacg
ctggacatgggatttttaagcgacattgattttattgctcagcgtctaatgcgggattgt
gtcctagcagctttttctgccactattccagtgaaactcgctaattttttgcgcaaatat
atggctaaaccggagacaattatcattgataaccctgctgttatctctcccacagtcaaa
aacgatttaattgatattggtgctaaaaaacgcgaaaaagtactttaccaagttttaact
ctcggtcagccgtatttagcattgatttttgccaatacgaaacaaacagtagacgaattg
gctgcttttcttactaatcaaggacttaaagtagctaaaatacacggcgggataactgaa
cgtgaacggaaaaggactttgcgtgaggttgaagcggggcaatatcaatacgttgtggca
actgatctcgcagctcgcggtttagatattaagggcgttagtttagttgttaattatgaa
attccacgtgaactagaatttgtcgtccatcgtatcggcaggactggtcggaatggaatg
agtggtcacgcaattactttaattcgcgaagaagaaatggatcgcattctgaaattggaa
agaatgggtattcaatttgattttgttgaagttaaaaatggtgccctggtaccacgaaag
cattatcatagtcgtaactctaggcaatcagctgcccacagtttagataataaaatgagg
ggtatggttaataaagcgaaaaagaagcgcaaacctggttataagaaaaagattaaacgt
gctattcagcaagataaagcccagaaaaataaaattgagcagcgcaataagattcgcaag
gcaaagaggcaaagaaaaagacgtcgtgaagatcaatcttaa
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