KEGG   Leclercia adecarboxylata: APT61_00835
Entry
APT61_00835       CDS       T04232                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
lax  Leclercia adecarboxylata
Pathway
lax03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    APT61_00835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lax03019]
    APT61_00835
Enzymes [BR:lax01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     APT61_00835
Messenger RNA biogenesis [BR:lax03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     APT61_00835
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22 CMS1
Other DBs
NCBI-ProteinID: ALZ94629
UniProt: A0A5P6HEA8
LinkDB
Position
complement(185879..187144)
AA seq 421 aa
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQSTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLSAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIVFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPEALLSELPPAKRLTRARSGNGPRRNSAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaagtc
atcgaagcccttgaaaataaagggtttcataactgcacgcctattcaggctctcgccctc
ccgctaacgctggctggtcgcgatgttgcagggcaggcgcaaaccggtactggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactttctcacccggcaattgctgaccgc
aaagttaaccagccgcgcgcgctgattatggccccgacgcgagaactggcggtacagatc
cacgctgacgcagagccactggcacagtccaccggcctgaaactcggcctggcctacggc
ggtgacggttatgacaaacagctgaaagtgctggaaagcggcgtcgatattctgatcggc
accaccggccgtctgattgattacgctaaacagaaccatatcaacctcagcgctatccag
gttgtggtgctggatgaagccgatcgcatgtacgatctcggctttattaaagatatccgc
tggctgttccgtcgcatgcctgccgctaaccagcgtctgaacatgctgttctcggcaacg
ctgtcgtatcgcgtccgtgagctggcgttcgaacagatgaacaacgccgaatacgtcgaa
gtggaaccggaacagaaaaccggccaccgtattaaagaagaactcttctatccgtcgaac
gaagaaaagatgcgtttactgcaaacgctgatcgaagaagagtggccagatcgcgctatc
gtgttcgccaacaccaaacaccgctgtgaagatatctggggccacctggctgcggatgga
catcgtgtaggtctgttgaccggcgacgtcgcgcagaaaaaacgcctgcgcatccttgaa
gaatttacccgtggcgacctggatattctggtggcgacggacgtggctgcacgcggcctg
cacatcccggcagtgacccatgtctttaactacgacctgccggatgattgcgaagattac
gttcaccgtatcggtcgtaccggtcgtgcgggcgccagcggtcactctatcagcctcgcc
tgtgaagagtacgctctgaacctgccagcgattgagacctatatcggtcactcgattccg
cagagtaaatacaacccggaagcgctattaagcgaactgccgccagcgaagcgcctgacg
cgtgcccgttccggcaatggcccgcgccgtaacagcgcaccgcgtaaccgtcgtcgttca
ggctaa

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