Leclercia adecarboxylata: APT61_02180
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Entry
APT61_02180 CDS
T04232
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lax
Leclercia adecarboxylata
Pathway
lax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APT61_02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lax03021
]
APT61_02180
03400 DNA repair and recombination proteins [BR:
lax03400
]
APT61_02180
Enzymes [BR:
lax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APT61_02180
Transcription machinery [BR:
lax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APT61_02180
DNA repair and recombination proteins [BR:
lax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APT61_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ALZ94883
UniProt:
A0A1V2YVZ6
LinkDB
All DBs
Position
457388..458377
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactctgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtacttcatgagtacagcaccaaagaaggcgttcaggaagatatccttgaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgaagttattctt
actctgaataaatctggcattggccctgtgactgcagccgatatcacccacgacggtgat
gtcgaaatcgtcaagccgcagcacgtgatctgccacctgaccgatgagaacgcagctatt
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcatgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccatcctggcagaacaactggaagctttcgttgacttacgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcttcacgtggtctgtctctgggcatgcgcctggaaaac
tggccaccggcaagcattgctgacgagtaa
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