Entry |
|
Name |
(GenBank) transcriptional regulator
|
KO |
K18765 | RNase E specificity factor CsrD |
|
Organism |
lax Leclercia adecarboxylata
|
Brite |
KEGG Orthology (KO) [BR:lax00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:lax03019]
APT61_02400
Messenger RNA biogenesis [BR:lax03019]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
APT61_02400
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
498617..500557
|
AA seq |
646 aa
MRLSTKFSAFISLLTGLTIFVTLIGCSLSFYNAIQGKLANRVHSVASVIDSRLVSTPFPE
LSHQLDELMAPVEITRVEIKQGGKTIFSHNGLKGYRPAGAPLQNLELTVPSLKNPGMTIS
LAYLDPMNSYFRSLVTTAPLTVAVIFVVVLIFLAVRWLRRQLSGQELLEARSVRILNGER
GAPVRGSVYEWPSRTSSALDVLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDN
QLATLLEDPEKVGSHGVVMIVRLPDFDLLKDNWGRAVAEEHLFMLINMLSTFMMRYPGAL
LARYHRSDYAVLLPHRTLKESESIASLLLKSVDTLPPSKMLDRDDMVHIGICAWRGGQTT
EQVMEHAEAATRNAVLQGANSWAVYDDSLPEKGRGNVRWRTLIEQMLTRGGPRIYQKPAV
LANGQVHHRELLCRIFDGNEEVVSAEYLPMVLQFGLSEEYDRQQISRLMPFLSFWPEEHL
ALQVTVESLIRPRFQRWLRDVLMQCEKSQRKRIIFELAEADVCQHISRLQPVVRLINALG
ARVAVTQAGLTLVSTSWIKALEVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTQTHV
FATGVRSRTEWRTLTERGVTGGQGDFFAASQPLDSNVKKYSQRYSV |
NT seq |
1941 nt +upstreamnt +downstreamnt
atgcgattatcgacgaagttctccgctttcatctccttgctgactggcttgaccatcttt
gtcaccctgatcggctgctcgctcagtttttataatgcgatccaagggaagctggcgaac
cgcgtacactccgttgcgtcggtcattgattcgcgtcttgtcagcacaccttttcctgaa
ctttcccatcagctggacgagctgatggcaccggtggaaatcacgcgtgttgagattaag
cagggcgggaaaaccattttcagccacaacgggttaaaaggctatcgaccggccggcgcg
ccactccagaatctcgaactgaccgttccttctcttaaaaaccccggtatgaccataagt
ctggcctatctggacccgatgaacagttattttcgttcgttggtgaccaccgcaccgctg
acggtagcggtgatcttcgtggtcgtgctgatctttctggcagtgcgctggctgcgtcgc
cagctctccgggcaggagttactggaggcgcgttcggtgcgcatcctcaacggtgaacgt
ggcgcccctgtgcgcgggtccgtctatgaatggccatcacgcaccagcagtgcgctggac
gttctgctgtctgaaattcagtttgccagcgaccagcgcagccggatggacacgctaatt
cgctcctatgccgcccaggacaacaaaacgggccttaataaccgtcttttctttgataat
cagctggctaccctgctggaagatcctgaaaaggttgggtcgcacggggtggtgatgatt
gttcgcctgccggacttcgatctactgaaagacaactggggacgggcagtggcggaggag
catctgtttatgctcatcaatatgctctccacctttatgatgcgctatcccggcgcactg
ctggcgcgctatcaccgcagtgattacgccgtgctgctgccgcatcgtaccctgaaagag
tcagagagcattgccagcctgctgttgaagtcggtggatacgctgcctcccagcaaaatg
ctcgatcgtgatgacatggtgcatattggcatttgcgcctggcgcggcgggcagaccacc
gaacaggtgatggagcacgccgaagccgccacccgcaatgctgtgttgcagggggctaac
agctgggcggtttatgatgactccctgccagagaaagggcgcggcaatgtgcgctggcgt
actctgatcgaacagatgcttacccgcggcggaccgcggatttatcaaaaaccggcggtg
ctggcaaatggccaggtccatcaccgggagctgctctgccgcatctttgacggcaacgaa
gaggtagtttcagcagaatatctgccgatggtgctgcagtttggcctgtcggaggagtac
gaccgccagcaaatttcgcgattgatgccattcttatccttctggcccgaagaacacctg
gcgctgcaggtgacggtggagtctttgatccgcccgcgtttccagcgctggctgcgcgat
gtgttgatgcaatgtgaaaaatcgcagcgtaaacggattatttttgaacttgcagaggcg
gatgtttgtcaacacatcagtcggttacagccggtggtacggctgatcaatgcgctgggt
gcgcgtgtggcggtaacgcaggcgggcttgacgctggtcagcaccagctggatcaaggcg
ctggaggtagagctgttgaagctgcatccggggctggtaaggaacattgaaaaacgtacg
gaaaaccaactgctggtacagagtctggttgaagcctgcaagggaacgcaaacccatgtt
tttgccacaggtgtgaggtctcgaaccgaatggcggacgttgacagagcgcggagttaca
gggggtcagggcgatttttttgctgcctctcagcctcttgacagcaatgtgaaaaaatat
tcgcaaagatactctgtttaa |