Leclercia adecarboxylata: APT61_02835
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Entry
APT61_02835 CDS
T04232
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lax
Leclercia adecarboxylata
Pathway
lax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APT61_02835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lax03019
]
APT61_02835
03016 Transfer RNA biogenesis [BR:
lax03016
]
APT61_02835
Enzymes [BR:
lax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
APT61_02835
Messenger RNA biogenesis [BR:
lax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
APT61_02835
Transfer RNA biogenesis [BR:
lax03016
]
Prokaryotic type
tRNA degradation factors
APT61_02835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
aRib
S1_2
OB_RRP5_4th
KH_2
S1_RRP5
KH-I_KHDC4-BBP
Spt6_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ALZ94996
UniProt:
A0A4U9IQ65
LinkDB
All DBs
Position
592160..594292
Genome browser
AA seq
710 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGSARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDDALDANELSEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITKEIMHAALNQAKGARLHILSVMEQA
INAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSSAAAPEAPAAEQGE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtacggtcagcataccgtcacgctggaaacc
ggcatgatggcgcgtcaggccactgctgctgttatggtaagcatggatgacaccgcggta
ttcgtaaccgtggttggccagaaaaaagcaaaaccaggtcaggacttcttcccactgacc
gttaactaccaggagcgtacctacgctgccggtaaaatcccgggtggtttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgattgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgccaccgttgtttccgtt
aacccacaggttaacccggacatcgttgcgatgatcggcgcatctgcagccctgtctttg
tctggtattccattcaacggtccaatcggttctgctcgcgtgggttacatcaatgaccag
tacgttctgaacccaactcaggacgagctgaaagagagcaagctggacctggttgttgcc
ggtaccgaagctgcggtactgatggttgaatccgaagcagaactgctgagcgaagaccag
atgctgggcgcggtggtgtttggccacgagcagcagcagatcgttatccagaacatcaac
gacctggtgaaagaagccggtaaaccacgttgggactggcagccagaagcggttaacgaa
gcgctgaacgcgcgcgttgctgcactggctgaatctcgtctgagcgatgcttaccgcatc
accgacaagcaagagcgttatgctcaggttgacgtcatcaaatctgaaaccatcgctacg
ctggtggcagaagatgacgccctggacgctaacgaactgagcgaaattctgcacgcgatc
gagaaaaacgttgttcgtagccgcgttctggcaggcgagccacgtatcgatggccgtgaa
aaagacatgatccgtggtctggatgtgcgtactggcgtgctgccacgtactcacggttcc
gcactgttcacccgtggtgaaactcaggcgctggtaactgcgaccctgggtactgcccgt
gacgcacagaacatcgacgaactgatgggcgagcgcactgacagcttcttgttccactac
aacttccctccgtattccgtgggtgagaccggtatggttggctcgccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgttctggctgttatgcctgatgctgataag
ttcccgtacaccgttcgcgtggtttctgaaatcaccgaatctaacggctcctcttctatg
gcttccgtgtgtggtgcttctctggcactgatggacgcgggtgttccggtgaaagcagct
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactacgttgttctgtctgac
atcctgggcgacgaagatcacctgggtgatatggacttcaaagttgcgggttcccgcgaa
ggtatctctgccctgcagatggatatcaaaattgaaggcatcaccaaagagatcatgcac
gctgcgctgaaccaggcgaaaggtgcgcgtctgcacatcctgagcgtgatggaacaggcg
attaacgcgccacgtggcgacatttctcagttcgcaccacgtatccacaccatcaagatc
agcccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgctctgacc
gaagagaccggcaccaccatcgaaatcgaagatgacggtactgtgaagatcgcagcgacc
gacggtgagaaagcgaaattcgctatccgtcgtatcgaagagatcaccgcagagatcgaa
gtgggccgaatctatagcggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggtggcggtaaagaaggtctggtacacatctctcagatcgctgacaagcgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagttccggttaaagttctggaagttgac
cgtcagggccgtatccgtctgagcattaaagaagcgaccgagcagtcatctgccgctgca
ccggaagctccggcagcagaacagggcgagtaa
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