Leclercia adecarboxylata: APT61_02845
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Entry
APT61_02845 CDS
T04232
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lax
Leclercia adecarboxylata
Pathway
lax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APT61_02845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lax03019
]
APT61_02845
03009 Ribosome biogenesis [BR:
lax03009
]
APT61_02845
Enzymes [BR:
lax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
APT61_02845
Messenger RNA biogenesis [BR:
lax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
APT61_02845
Ribosome biogenesis [BR:
lax03009
]
Prokaryotic type
rRNA helicases
APT61_02845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALZ94998
UniProt:
A0A5P6HDB7
LinkDB
All DBs
Position
595467..597383
Genome browser
AA seq
638 aa
AA seq
DB search
MAEFETTFADLGLKAPILESLNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLAQIQPTAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGPRRDGDRPAGRGFGGGERREGGR
GPRREGAAPGAGRFSGERRESRGPRREDGSAPARRRDA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaatcc
cttaacgatctgggttacgaaaaaccatctccgatccaggcagagtgtatcccacatctg
ctctctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcgttc
tcgctgccgctgctgaacaacattgatcctgacctgcgcgcgccgcagatcctcgtactc
gctccgacccgtgaactggctgttcaggttgcggaagcgatgactgaattctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgtcaaggcccacagattgtcgtcggtacgccgggtcgtctgctggatcacctg
aaacgcggtacgctggatctctctaaactgagcggtctggtactggatgaagctgacgaa
atgctccgcatgggcttcatcgaagacgtagaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgcaaccatgccagaagcgatccgtcgtattacccgtcgc
ttcatgaaggatccgcaggaagtgcgtatccagtccagcgtaaccacgcgcccggacatc
agccagagctactggtctgtatacggtatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcagaagattttgatgcggcgatcatcttcgttcgtaccaaaaatgcgaccctggaa
gtggctgaagccctggaacgtagcggctacaacagcgcagcgctgaacggcgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactac
gacatcccgatggactctgagtcttacgttcaccgtatcggccgtaccggtcgtgcaggt
cgtgcgggtcgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgaccattccagaagccgacctgcctaacgcagatctgctgggt
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgacctg
gatcagtaccgtgcgctgctggcgcagatccagccaaccgctgaaggcgaagagctggat
atggaaacgctggctgccgctctgctgaagatggctcagggcgaacgtagcctgatcgtg
ccacctgatgcgccaatgcgtcctaagcgtgaattccgtgaccgtgacgatcgtttcgaa
cgtcgtggcgaccgcaacgatcgtggcccacgtggcgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgcgaacgtcgtgacgcaggcgaaatggaactgtaccgcattgaagtg
ggccgtgatgatggcgttgaagttcgtcacatcgttggtgctatcgctaacgaaggcgac
atcagcagccgttacattggtaacatcaagctgtttggttctcactctaccattgagctg
ccaaaaggcatgccgggcgaagtactgcagcactttactcgcacccgtatcctgaacaag
ccgatgaacatgcagctgctgggtgatgctcagccacgcccggaccgtggtccgcgtcgt
gatggcgatcgtcctgctggccgtggcttcggtggcggcgaacgtcgtgaaggcggtcgt
ggtcctcgtcgtgaaggcgctgcgccaggtgcaggtcgtttcagcggtgagcgccgtgaa
agccgtggcccacgtcgcgaagatggcagtgctcctgcccgtcgccgtgacgcgtaa
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