Leclercia adecarboxylata: APT61_04465
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Entry
APT61_04465 CDS
T04232
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
lax
Leclercia adecarboxylata
Pathway
lax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
APT61_04465 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lax03400
]
APT61_04465 (recB)
Enzymes [BR:
lax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
APT61_04465 (recB)
DNA repair and recombination proteins [BR:
lax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APT61_04465 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALZ95300
LinkDB
All DBs
Position
934156..937701
Genome browser
AA seq
1181 aa
AA seq
DB search
MTDTAESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFSRPLSVEELL
VVTFTEAATEELRGRIRANIHELRIACLRQSTDNPLYASLLDEIEDTQQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
EAVHGLWKGPEELLRSIDRYLQGEAPVIKSPPPADETLASRHEKIVGLIVTMKQQWCSSV
AEIDAVIERSGIDRRKFNRGNQAKYIERVTAWAQEEKHSYQLPDALEKFSQTFLAERTKA
GGEVPQHPLFAAIDTLLAEPLTLNDLMITRALAEIRAAVAREKRRRGELGFDDMLSRLDE
ALNSDNGDALAAAIRGRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGDPKQAIY
AFRGADIFTYMKARGEVAAHYTLDTNWRSAPGMVESVNTLFSQMNDAFMFREIPFLPVKS
APKNAGLRFELRGDFQPAMNVWLMEGEGCGVGDYQAFMAQHCAAQIRDWLSAGVRGEAIL
HRGDEARPVRASDITVLVRSRQEAALVRDALTLLTIPSVYLSNRDSVFETLEAQEMLWLL
QAVLAPERESILRSALASSMLGLTARDIDMLNNSETLWDEAVEEFTHYRERWQKRGVMAM
LRDIMTQRNIAENMLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLAQHIAEPNS
NASSQQMRLESDKHLVKIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRKTFEAVLDL
SKAEDSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGDKSGDSDFHLSALGR
LIQRGEPKDAAGLRQCLETLCTGPLALQIAGVADTARWNMPESTMPDLQARQVARVLFDD
WRVTSYSGLQQRGHSIAQDLMPRLDIDAAGTGEVVQEPELTPHQFPRGASPGTFLHGLFE
ALDFTQPVSPEWVLEMLQKGGYDARWQPVLTQWITQVLQTPLNEEGVSLSQLSATDKQVE
MEFYLPVAGPLTADALDALIREYDPLSRDCPPLDFRQVRGMLKGFIDLVFRHNGRYYLLD
YKSNWLGENGEAYTPEAMARAMQSHRYDLQYQLYTLALHRYLRHRIADYDYQRHFGGVIY
LFLRGMDGSSPGAGCFTTRPDEMLINQMDSLFSASREELVS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgccgagtcccttgatcccctacgtttaccgttacagggggagcgactg
atagaggcctcagcgggaaccggaaaaaccttcaccattgcggcactctatctgcgtctg
ctgctcggactgggcggcagcgcagccttcagccgcccgctcagcgtagaagagcttctg
gtggtgaccttcaccgaagccgcaacggaagaactacgcggccgtatccgcgctaacatt
cacgaattgcggattgcctgcctcagacagagcacagataacccgctatatgccagcctg
ctggacgagatcgaagatacccagcaggcggcgcagtggctgctactggcggaacgccag
atggacgaggccgccgtgttcaccatccacggcttctgtcagcggatgctcagcctgaac
gcctttgaatccggcatgctctttgagcaacaactgatcgaagatgaatccctgttgcgc
taccaggcgtgcgccgatttctggcgtcgtcactgctaccccttgccacgtgatattgcc
gaagcggttcatggtttatggaaagggccggaagagttactccgctccatcgatcgttat
ctgcagggcgaagccccggtcattaaatcccctccgcctgcggacgaaacgctggcctcc
cgccatgagaagattgtcggcttaattgtcaccatgaagcagcagtggtgcagcagcgtg
gcggaaatcgacgcggttattgaacgttcgggtatcgaccggcgtaagttcaaccgcggc
aaccaggcaaaatacatcgagcgtgtgacggcctgggctcaggaggagaagcacagctat
caactgcctgacgcgctggaaaagttctcgcaaacgtttcttgcggagcggacaaaagcg
ggtggcgaagtgccgcagcaccctctgtttgccgccatcgacactctgctggctgagccg
ctgaccctgaacgatctgatgatcacccgcgcgctggcagagatccgcgccgcagtggcg
cgggaaaagcgccgccgtggcgagctgggctttgacgatatgctcagtcgtctcgatgag
gccctgaacagcgacaatggtgatgcgctggctgcggctattcgtggccgtttcccggtg
gcgatgatcgatgaatttcaggataccgacccccagcagtaccggattttccgccggatc
tggcgtcagcagccagacactgccctgctgctgattggtgacccgaaacaggcgatctat
gcgttccgtggggcagatatctttacctatatgaaagcgcgtggcgaagtcgccgcgcac
tatacgctggataccaactggcgctcagcgcccggaatggtagaaagcgtgaataccctc
ttttcacaaatgaacgacgccttcatgttccgtgaaatcccgttcctgccggtcaaatcg
gccccgaaaaatgccgggctgcgctttgagctgcggggtgattttcagccagcgatgaac
gtctggctgatggagggcgagggatgtggcgtcggagattatcaggcctttatggcccag
cactgcgcggcacaaatccgcgactggctgagtgcgggtgttcgcggtgaagccatcctg
catcggggtgacgaggcccggccggtaagagcctcggacatcacggtgctggtgcgcagt
cgtcaggaagcggcgctggttcgcgatgcgctgacgctgctgactatcccttcggtctac
ctctccaaccgcgacagcgtgtttgaaacgctggaagcccaggagatgctctggctgctg
caggcggtgctggcacccgaacgtgaaagcatcctgcgcagcgcgctggcaagctctatg
ctcgggcttaccgctcgcgacatcgacatgctgaataacagtgaaaccctctgggatgag
gcggtagaagagtttacccactaccgcgaacgctggcagaagcggggcgtgatggcgatg
ctgcgcgacatcatgacgcagcgcaatattgcggaaaatatgctggccaccgccggcggc
gaacgccgtctgaccgatattttgcacatcagcgagttgctccaggaggcgggaacgcag
ctggagagcgagcacgccctggtgcgttggctggcgcagcatatcgccgaacctaacagc
aatgcctccagccagcagatgcgcctcgaaagcgataaacatctggtaaaaattgtcacc
attcacaaatcgaaaggactggaatacccgctggtctggctgccctttattgccaactac
cgggtgcaggatcaggccttttaccacgatcgcaaaacctttgaagccgtgctcgatctc
agcaaggcggaggacagcgttgagctggccgaagccgagcggctggcggaagatttgcgc
ctgctgtatgtggcattaacccgctcggtctggcattgcagtctgggcgtcgcgccgctg
tttcgtcgtcgtggcgacaagtctggtgacagcgatttccatctcagtgcgctgggtcgc
ctgatccagcgcggtgagccgaaagatgccgccgggctgcgtcagtgtctggaaaccctc
tgcactggccctcttgcgctgcagattgccggggtggccgataccgcccgctggaacatg
ccggagtcaacaatgccggatctgcaggcgcggcaggtggctcgcgtactgttcgatgac
tggcgagtgaccagttattccgggctgcaacagcgcgggcacagtatcgcccaggattta
atgccgcgcctcgacatcgatgccgcaggcactggcgaggtcgtacaagagccggagctg
acgccacatcagttcccgcgcggtgcctcgccgggcacctttttacacggcctgtttgaa
gcgctcgattttacccaacccgtctcgccggagtgggtactggagatgttgcagaaaggc
ggctatgacgcccgctggcagccggtgttaacccagtggatcacccaggttctgcagaca
ccgctcaatgaggagggggtctcgctgagccagctatcagccaccgataaacaggttgag
atggagttttacctgccggttgccgggccgcttaccgccgatgcgctggatgcattgatc
cgcgagtacgatccgctgtcacgcgactgcccgccgctcgatttccgccaggtgcgcggt
atgctgaaaggctttatcgacctggtgtttcgccataatggccgctactacctgctggac
tataagtccaactggctgggagaaaatggcgaggcctataccccggaggcgatggcgcgc
gcgatgcagtcccaccgctacgatctgcaatatcagctctacacgctggcgctacaccgt
tatctgcgccaccgtatcgctgattatgactatcagcggcatttcggcggggtgatctac
ctgtttttacgcgggatggacggcagctcgccgggggccggttgctttaccacccgcccg
gatgaaatgttaataaatcaaatggatagcttgttttctgcaagccgagaggagcttgtg
tcatga
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