Leclercia adecarboxylata: APT61_04615
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Entry
APT61_04615 CDS
T04232
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lax
Leclercia adecarboxylata
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lax03009
]
APT61_04615 (rumA)
Enzymes [BR:
lax01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
APT61_04615 (rumA)
Ribosome biogenesis [BR:
lax03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
APT61_04615 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
MTS
Methyltransf_11
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_23
Methyltransf_4
Methyltr_RsmB-F
Ubie_methyltran
FtsJ
Methyltransf_15
TPMT
Motif
Other DBs
NCBI-ProteinID:
ALZ95324
LinkDB
All DBs
Position
967969..969267
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AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVDVTDLDPFGQGVARHDGKALFIPGLLPDERAEITLTEEKRQ
YARGQVKRRLNDSPQRETPRCPHFGVCGGCQQQHASVALQERSKSNALARLLKHDVNEVI
ADKPWGYRRRARLSLNYQPKTARLEMGFRKANSSDIVDVKQCPILVPQLEALLPEVRKCL
SELQGVRHLGHVELVLANSGPLMVLRHTAPLSAKDREKLERFSHSHELDLYLAPQSEILE
QLSGETPWYDSDGLRLTFSPRDFIQVNDGVNQQMVATALAWLDIKPEDRVLDLFCGMGNF
TLPLAKRAHSVVGVEGVAALVEKGRDNAVNNGLQNVTFFHENLEEDVTRQPWAAHGFDKI
LLDPARAGAPGVMQHIIKLAPKRVVYVSCNPATLARDSEALLAAGYQIQRLAMLDMFPHT
GHLESMALFEHN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaagcggcgcgtgacgacgcgtcagatcataactgttgat
gtgacagacctcgatcccttcggtcagggggtggcgcgccatgatggtaaagcccttttt
attccgggtctgctgcccgacgagcgcgcagagatcaccctgacggaagagaaacgtcag
tatgcgcgcgggcaggtaaaacgccgccttaatgacagcccccagcgcgagacgccgcgc
tgcccgcactttggcgtctgcggcggctgccagcagcagcatgccagcgtcgcgttacag
gagcgcagcaaaagcaatgctctggcgcgcctgctgaagcacgacgtcaacgaagtgatc
gccgataaaccctggggctaccgccgccgggcgcgtctgagcctgaactatcaacccaaa
accgcgcgtctggaaatgggttttcgcaaggctaattccagcgacatcgtcgatgtcaaa
cagtgccccattctggtgccccaacttgaggcattgctgccagaagtgcgcaaatgcctc
tctgagctgcagggcgttcgccacctgggccatgtcgaactggtgctggccaacagcggc
ccgctgatggtcttgcgtcatactgcaccgctttcggcaaaagatcgcgaaaaactggaa
cgcttttcgcattcccatgagcttgacctttatctcgccccgcaaagcgagatacttgag
caactcagcggtgaaacgccctggtacgattcagacgggctacgcttaacgttcagcccg
cgcgatttcattcaggtcaatgatggtgttaaccagcagatggtagccaccgcactggcc
tggctggatattaagcctgaggaccgggtgctcgatctgttctgcggaatgggtaacttt
accttgccgctggcaaaacgggcgcacagcgtggtgggtgttgaaggcgtggcggcgctg
gtggagaaagggcgtgacaatgccgttaataatgggctgcaaaacgtgacattttttcac
gagaatctggaagaagatgtcacccggcaaccctgggccgcgcacggcttcgacaaaatt
ctgctggatccggcacgtgcaggcgcgccaggcgtaatgcagcatattattaaactggcc
cctaaacgcgtggtctatgtttcctgtaacccggcgacgcttgcccgggacagcgaagca
ttattagcggcgggttaccagattcagcgtctggcaatgcttgatatgttcccgcacact
gggcatctggaatcaatggcgttgtttgaacacaactga
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