Leclercia adecarboxylata: APT61_04730
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Entry
APT61_04730 CDS
T04232
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lax
Leclercia adecarboxylata
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lax03016
]
APT61_04730 (truD)
Enzymes [BR:
lax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
APT61_04730 (truD)
Transfer RNA biogenesis [BR:
lax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APT61_04730 (truD)
Prokaryotic type
APT61_04730 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ALZ95347
LinkDB
All DBs
Position
992479..993528
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AA seq
349 aa
AA seq
DB search
MTDFDNLTYLHGKPQGTGLLKANPEDFVVIEDLGFEPDGEGEHILVRILKNGCNTRFVAE
ALAKFLKIHAREVSFAGQKDKQAVTEQWLCARVPGNGMPDLSQFQLEGCKVLEYARHKRK
LRLGALKGNAFTLVLREVSNRDDVEKRLQAISEQGVPNYFGAQRFGIGGSNLQGALRWAQ
SNAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDANQVVVGDALQLAGRGSWFVATDEE
MADLQARVNAKTLLITAALPGTGEWGPQGEALQAEQAAIADETELCSLLVREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggacttcgataacctgacgtacctgcacggtaaaccacagggcacgggcctgcta
aaggccaatccagaagatttcgtggtgatcgaagatctgggctttgagccggatggcgag
ggcgagcacattttggtgcggatcctgaaaaacggctgtaacacccgttttgttgccgag
gcgctggctaagttcctgaaaattcatgcccgtgaagtaagcttcgccgggcagaaagat
aaacaagctgtgaccgagcagtggctctgcgcccgcgtaccgggtaatgggatgccggat
ttaagccagttccagcttgaaggctgtaaagtacttgaatacgctcgtcacaagcgcaaa
ttgcgcctcggcgcgttaaagggcaatgcttttacgctggtactgcgtgaagtgagcaac
cgcgacgacgtcgaaaaacgcctgcaagccatcagcgagcagggcgtgccgaactatttt
ggtgcccagcgttttggtattggcggcagtaacttgcagggcgcgctgcgctgggcgcaa
agcaatgccccggtgcgtgaccgcaataaacgcagtttttggttgtcggcagcccgcagt
gcgttgtttaatcaaatcgtgagcgagcgtctgaaaaaaacagacgcgaatcaagttgtt
gttggcgatgcgctacaattagcgggacgcggcagctggttcgtcgccactgacgaagaa
atggctgatttgcaggcgcgcgtcaatgcgaaaaccctgctgatcaccgcggccctgccg
ggtaccggcgaatgggggccgcagggcgaggcgctgcaggctgagcaggcggccatcgcc
gatgaaacagaattatgctctctgctggtgcgggaaaaagtcgaagcggcacgccgggcg
atgctgctctatccgcaacagttgagctggaactggtgggatgacgtgaccgtcgagtta
cgtttctggctgccggcaggtagctttgccaccagtgttgtcagggaacttatcaacact
tcgggtgactatgcgaatattgctgagtaa
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