Leclercia adecarboxylata: APT61_08040
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Entry
APT61_08040 CDS
T04232
Symbol
rcsA
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
lax
Leclercia adecarboxylata
Pathway
lax02020
Two-component system
lax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APT61_08040 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APT61_08040 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lax03000
]
APT61_08040 (rcsA)
Transcription factors [BR:
lax03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
APT61_08040 (rcsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
XFP_N
Motif
Other DBs
NCBI-ProteinID:
ALZ95959
LinkDB
All DBs
Position
complement(1739794..1740417)
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AA seq
207 aa
AA seq
DB search
MSTIIMDLCSYTRLGLTGYLASRGVKKKDINDVHNVDELAAACETLTPGVVFINEDCFIH
DPANSQQIKQIINQHPGTLFIVFMAIANLHFDEYLRVRQNLLISSKSIKPESLDDLVGDY
LSKEIKNVAEIKFPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLTDNVTNGIFVNLR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgatcattatggatttatgcagttacacccggctagggttaaccgggtatctg
gcaagcagaggggtaaagaaaaaagacatcaacgacgtacataacgttgacgaacttgcc
gccgcatgtgagaccttaacgccaggagtggtgtttattaatgaggactgtttcatacat
gatcctgccaacagtcagcaaataaagcagatcattaatcaacatcccggcaccctgttt
attgtatttatggcgattgctaatctacattttgacgaatatttacgggtccgtcagaat
cttctgattagttctaaatccattaagcccgagtcactggatgacctggtgggggattat
ttaagcaaagaaataaaaaatgtagcagaaattaaatttccgactttatcattaagccga
actgaatccagtatgctgcgaatgtggatggcaggacagggaacgattcagatttctgac
cagatgaatatcaaagccaagactgtttcgtcacataaaggaaatattaaaaggaaaata
aaaacgcataataagcaagtgatctatcatgttgtgcgactgacagacaatgtgaccaac
ggaattttcgttaacctgcgttaa
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