Leclercia adecarboxylata: APT61_09620
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Entry
APT61_09620 CDS
T04232
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
lax
Leclercia adecarboxylata
Pathway
lax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APT61_09620
Enzymes [BR:
lax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
APT61_09620
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ALZ96249
UniProt:
A0ABU6I6G4
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All DBs
Position
complement(2058182..2060173)
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AA seq
663 aa
AA seq
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MIDDVEQNLLFRYMGTHSPWWRLTADSNALHLAASESADTTQVVALTDEQANHIRQMTVI
TSSITMTLSLYGSEVPVHLVGRKITKKEWAGTASAWHDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDRHGNIQRFNRLSEEYTGMKEHEVIGQNVFKLFMSRSEAAASRRNISGFFRDG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHDLISAAIDTRGEGQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLEEGQLLARLGGDEFIVLATNTSQGALEAMASRILTRLRQPFRIGLIEVYTGCSLGI
SLAPQHGTDRESVIRNADTAMYTAKENGRGTFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLVIHYQPKITWRGEVKTLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLDFEYCPIDVELTESCLIENE
ELALSVIQQFSKLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQAFVRDIHKQSVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPVVAFERWFKRYQSR
NAR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgatgtggagcaaaatttgctgtttcgttacatgggcacccacagtccctgg
tggcggttaacggcagacagcaatgcgcttcatcttgcggccagtgaaagcgcagatacg
acgcaagtagtcgccctgaccgacgaacaggcaaatcatattcgccagatgacggtgatt
acctccagcattaccatgacgctctccctgtacggttccgaagtacctgtgcatctggtg
ggccgcaagattactaaaaaagagtgggccggcaccgcctctgcctggcacgacacccct
tctgttgcccgcgacctggcgcaaggtttatcttttgctgaacaggtggtttccgaagcc
aattcagtcattgtcatccttgaccggcacggcaatattcagcgctttaatcgtctgagc
gaagagtataccgggatgaaagagcatgaagttatcggccagaacgtcttcaaattgttc
atgagccgtagcgaagccgccgcctcccgccgtaacatcagcggtttttttcgtgacggt
agctcctatgaagtggaacgctggatcaaaacgcgcaaagggcagcgcctgttcctgttt
cgcaataaatttgtgcacagcggcagcggcaaaaatgaaattttccttatctgttccggg
acggatattactgaagagcgccgcgcccaggaacgactccgggtgctcgccaataccgat
accatcaccggcctgccaaaccgcaatgccattcacgatctgatcagtgctgctatcgac
acgcgtggcgagggccaggtgggtgtggtctaccttgacctcgataatttcaaaaaagtg
aatgacgcctacggacatatgtttggcgatcagcttttacaggccgtggcgctggcgatc
ctcagctgtctggaagagggccagcttctggctcgtctgggcggcgatgagttcatcgtg
ctggcgacgaatacatcgcagggcgcgctggaggctatggcctcgcggatcctgacccgc
ctgcgccagcccttccgcattggtttaatcgaagtctataccggctgttcgctgggtatt
tctctcgccccgcagcacgggaccgatcgtgaaagcgtgatccgcaatgccgacaccgcc
atgtacaccgccaaagagaacgggcgcggtacgttctgcgtcttttcgccagaaatgaat
cagcgtgtttttgaatacctgtggctggacaccaacctgcgcaaggcgctggataacgac
cagttggtgatccactatcagccaaaaatcacctggcgcggcgaggtcaagacccttgaa
gcgctggttcgctggcagtcgccggagcgcgggctgatcccgccgctcgaatttatctcc
tatgccgaagagtccgggcttatcgtgccgctgggccgctgggtcatgcttgatgtggtg
cgccaggtcgctaaatggcgcgataaaggtattaacctgcgggtcgccgttaacgtctcg
gcccgccagctggccgatcagaccatcttcagcgatctgaaacaggctctgaaggacctt
gattttgagtactgcccgattgatgtggagctgacggaaagctgcctgattgagaacgaa
gagctggcgctatcggtaattcagcagttcagcaagctgggggcgcagatccatctcgat
gattttggcaccggttactcctcgctgtcgcaactggcccgcttccccatcgatgccata
aagctcgatcaggcgtttgtacgtgatattcataagcagtcggtttcgcagtcgctggtg
cgggcgattgttgccgtcgcccaggcgctgaatttgcaggtcatagccgaaggggtagag
agtgctaaagaagacgcctttctgacgaagaatggcgtcaacgaacgacagggttttctt
tttgctaagcccatgcccgttgtcgcattcgagcgatggtttaaacgttatcagtcacgc
aatgcgcgttag
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