Leclercia adecarboxylata: APT61_09625
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Entry
APT61_09625 CDS
T04232
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lax
Leclercia adecarboxylata
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lax03016
]
APT61_09625
Enzymes [BR:
lax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
APT61_09625
Transfer RNA biogenesis [BR:
lax03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
APT61_09625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
ALZ96250
LinkDB
All DBs
Position
complement(2060496..2062430)
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AA seq
644 aa
AA seq
DB search
MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
TAVIHSEKDRESAEPEALIEPFLTRFVGKVLRKDDRLSIIPDHPLLKDAVPCRAERGVAH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEKEAPEGAAT
EMLDEGLTRRDLTALNFVTIDSASTEDMDDALYVEEQADGKLLLTVAIADPTAWIAEGTP
LDESAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANAVRPVLACRMTIASDGTIEENIEF
FAATIESKAKLVYDEVSDWLENSGTWQPANDAIAEQIRLLQRVCLSRSEWRKTHALVFKD
RPDYRFILGEKGEVLNIVAEPRRIANRIVEESMIAANICAARVLRDQLGFGIYNVHTGFD
PANSEALAALLKTHDVHVDPQEVLTLNGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIVKGETIARPQDETTVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVAYKVTEVIDVTIAEVRMETRSVIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgcca
cgtgctgaaggggtggtaaaagccacggaaaaaggctttggcttccttgaagtcgatgcg
cagaaaagctacttcattccgcctccgcagatgaagaaagtgatgcacggcgatcgtatt
accgctgtgatccatagcgaaaaggatcgtgaatccgccgagcctgaagcgttgatcgaa
cccttcctgacccgttttgtcggtaaggtcctgcgtaaagatgaccgtctgtccatcatc
ccggaccatcccctgctgaaagacgccgttccttgccgcgccgagcgcggtgtcgcgcat
gatttcaaagaaggtgactgggccgtggctgaaatgcgccgtcaccctctgaagggcgac
cgcggtttttatgcagaactgacccagtttattacatttggcgacgatcatttcgtgcca
tggtgggtcacgctggcacgccataacctggaaaaagaagcgcctgaaggcgcggcgacg
gagatgctggacgaaggtctgacgcgtcgcgatctcactgcgctcaattttgtgaccatc
gacagtgccagcactgaagatatggacgatgcgctgtatgtggaagagcaggctgacggc
aaactgctgttaaccgtggcgattgccgatccgacggcctggattgctgaaggcaccccg
ctggatgaatcggctaaaatccgcgccttcaccaactacctgccgggctttaacattccg
atgctgccgcgcgagctgtctgatgacttatgctcgctgcgagccaacgccgtgcgtccg
gtcctcgcctgtcgtatgaccatcgccagcgatggcactatcgaagagaacattgagttc
tttgccgcaaccatcgagtcgaaagccaagctggtgtacgacgaagtctctgactggctg
gaaaacagcggtacctggcagcctgccaacgacgccattgccgaacaaattcgtctgttg
cagcgcgtctgcctgagccgcagcgagtggcgtaagacccatgcgctggtgttcaaggat
cgccctgactaccgctttatcctcggtgaaaaaggcgaagtgctgaatatcgttgctgag
ccgcgtcgcattgctaaccgcatcgtcgaagagtcaatgattgcggccaacatctgtgcg
gcccgcgtgctgcgcgaccagctcggtttcggtatttataacgtgcacaccggctttgat
ccggcaaacagcgaagcgctggctgccctgctgaagacccacgacgtgcatgtcgatccg
caggaagtgctgacgctgaacggcttctgcaagctgcgtcgtgagctggatgcacagcca
tctgggttcctcgacagccgcattcgccgtttccagtctttcgcggagatcagcaccgaa
cctggcccgcactttggtctgggtctggaagcttatgcaacctggacatcaccgatccgt
aagtatggcgatatggtcaaccaccgcctgcttaaagctatcgtcaaaggtgaaaccatt
gcccgtccgcaggacgagaccaccgtgcagatggcagagcgtcgtcgtcttaaccgcatg
gcggagcgcgatgtgggtgactggctgtatgctcgattcctgaaagacaaagccgggact
gacacccgttttgcggctgaaatcatcgatatcagccgcggcggtatgcgcgttcgtctg
gtggataacggcgccgtggcatttattccggcaccgttcctgcacgccgtgcgtgatgaa
ctggtctgcagccaggagaacggcactgttcagattaaaggcgaagtggcttacaaggtg
accgaggttatcgacgttactatcgctgaagtccgcatggaaacacgcagcgttatcgcc
cgccctgcggtctga
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