Leclercia adecarboxylata: APT61_10155
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Entry
APT61_10155 CDS
T04232
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
lax
Leclercia adecarboxylata
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lax03019
]
APT61_10155
Enzymes [BR:
lax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
APT61_10155
Messenger RNA biogenesis [BR:
lax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
APT61_10155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
HA2_N
T2SSE
nSTAND3
NACHT
ResIII
PhoH
AAA_16
SLFN-g3_helicase
AAA_23
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ALZ96351
LinkDB
All DBs
Position
2186955..2190857
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKLTFPMLMQQLDALMLRDKQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGK
VVLREAARPAITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLRELLPRRPDLKVIITSATIDPERFSRH
FNNAPIIEVSGRTYPVEVRYRPMVEDADDTERDQLQAIFDAVDELGNESPGDILIFMSGE
REIRDTADALSKRDLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTPQGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYIGEQQKALSSNQFRRQCKLDFLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLLKRSYSEPHWERAQGAVMATE
KVTVYGLPVVAARKVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRENLKLRSEVEELE
HKTRRRDILVDDETLFEFYDQRISHDVVSARHFDSWWKKVSRETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLSYQFEPGTDADGVTVHIPLPLLNQVEESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRATPLELPLLDSLERELRRMTGVTIDREDW
HWDQVPDHLKISFRVVDEKNKKLQEGRSLTELKDALKGKVQETLSAVADDGIEQSGLHIW
SFGQLPESYEQKRGNYKVKAWPALVDERDSVSIKLFDNPQEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDQLINAAGGPVWTEEGFAKLHEK
VRAELNETVVNIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMAGLVYRGFVTG
NGYKRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVEAVQQRWQQWLNKLPPARRDDED
VQEIRWMIEELRVSFFAQQLGTPYPISDKRILQAMEQISA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacagaaattaacctttccgatgctgatgcaacagctggatgcgctgatg
ttacgtgacaaacagcggtttgcccgccgtctgcacggggttaagaaggttaaaaatcct
gatgcacaacaggccatctaccaggagatggcaaaagagatcgaacaggcggcgggtaaa
gtcgtgctgcgcgaagcggcgcgtccggcgatcacctacccggaaaacctgcccgtcagc
cagaagaaacaggaaattcttgaagccgtgcgcgaccaccaggtggtgattgtggcgggg
gagaccgggtcgggtaaaaccacccagctgccaaaaatttgtatggagctgggacgcggg
ctaaaaggcctgattggccatacccagccgcgtcgtctggcggcgcgaacggtggcaaac
cgcattgccgaagagctgcaaaccgagccgggcggctgcatcggctataaggtgcgtttc
agcgatcacgtcagcgacaacaccatggtcaagctgatgaccgacgggatcctgctggcc
gagatccagcaggatcggctgttgatgcagtacgacaccatcatcatcgatgaagcgcac
gagcgcagcctgaacatcgacttcctgctcgggtatctgcgggagctgctgccgcgccgc
ccggatctgaaagtcatcatcacctcggccaccatcgacccggaacgtttttcgcgccac
tttaataatgccccaatcattgaggtttcaggccgcacgtacccggtagaagtacgctac
cgtccgatggtcgaagacgccgacgacaccgagcgcgatcagctgcaggccatttttgat
gccgtggacgagctgggcaacgaaagcccgggcgatattctgatctttatgagcggcgag
cgcgaaatccgcgataccgccgacgcgctcagcaagcgcgatctgcgccacaccgaaatt
ttgccgctgtacgcgcgtttgtccaacagcgagcaaaaccgcgtcttccagtcccacagc
ggccgccgcatcgtgctggcaaccaacgtggcggaaacctccctcaccgtgccgggtatt
aaatatgtgattgaccccggcacggcgcgtatcagccgatacagctaccgcaccaaggtg
cagcgtctgccgattgagccggtgtcacaggcctcggccaaccagcgtaaaggtcgctgc
gggcgtgtttcggaagggatctgtattcgtctctattcagaagacgatttcctgtcgcgc
ccggaatttaccgatcccgaaattctgcgtaccaacctggcgtcggtcattctgcagatg
accgccctcgggttgggtgatatcgccgccttcccgttcgtcgaagcgccggataaacgt
aatattcaggacggtgtgcgcctgctggaagagctgggggcgatcacgaccgacgaacag
gccacggcctacaaactgacgccgcagggccgtcagctcagccagctgccggtggatccg
cgtctggcgcgaatggtgctggaggcgcaaaaacacggctgcgtgcgtgaggcgatgatc
atcacctcggcgctctccattcaggatccgcgtgagcgtccgatggacaaacagcaggcc
tccgacgaaaaacatcgccgtttccacgataaagagtccgatttcctcgcctttgtaaac
ctgtggaactatatcggcgaacagcagaaagcgctgtcgtcgaaccagttccgtcgccag
tgcaagctggatttccttaattacctgcgggtgcgcgagtggcaggatatttacacccag
ctgcgtcaggtggtgaaggagctgggcattccggtgaacagcgaaccggcagagtaccgc
gaaattcacatcgcgctgttgaccggtctgctgtcgcatatcgggatgaaagatgccgat
aaacaggaatttaccggcgcgcgtaacgcccgtttctccatcttcccaggctccgggctg
ttcaagaagccgccgaagtggacgatggttgccgagctggtggagaccagccgcctgtgg
ggccgcattgccgcacgtatcgacccggaatgggtggagccggtggcgcagcatctgctg
aaacgttcgtacagcgaaccgcactgggagcgggcgcagggcgcggtaatggcgaccgaa
aaggtcaccgtttacggcctgccggtggtggccgcgcgtaaggtcaactacagccagatc
gatccggccctcagccgtgagctgtttatccgtcacgcgctggtggagggtgactggcag
acccgtcacgccttcttccgggagaacctgaagctgcgcagcgaagtggaagagctggag
cacaaaacccgtcggcgcgacatcctggtggatgacgaaacgctgtttgaattttacgac
cagcgcatcagccatgatgtggtgtcggcccgccacttcgacagctggtggaaaaaggtc
agccgtgaaaccccggatctgctcaactttgaaaagagcatgttgatcaaagagggggcg
gagcaggtcagcaaactcgattacccgaacttctggcatcagggcaacctcaagctgcgc
ctgagctaccagtttgagccgggcaccgatgccgacggcgtgaccgtccatatcccgctg
ccgctgctcaaccaggtggaagagagcgggtttgagtggcaaatccccggcctgcgacgc
gagctggttatcgccctgattaaatcgctgccgaagccggtgcgccgcaactttgttcct
gcgccgaactacgccgaggcgtttttaggccgcgcgacgccgctggagctgccgctgctg
gattcgctggagcgcgagctgcgccggatgaccggcgtcaccatagaccgtgaagactgg
cactgggatcaggtgcccgatcacctgaaaatcagcttccgggtggtggacgagaagaac
aaaaagctgcaggaaggccgttcccttaccgaactgaaagatgccctgaaagggaaagtg
caggagaccttatctgccgtggccgacgacggtatcgagcagagcgggctgcatatctgg
agcttcggtcaactgccggaaagctacgagcagaagcgcggcaactacaaggtgaaagcc
tggccggcgctggtggacgagcgcgacagcgtgtcaatcaagctgtttgataatccgcag
gagcagcagcaggcgatgtggcgcgggctgcgccgcttgctgctgttgaacatcccgtca
ccgatcaagtatctgcacgagaagttgccgaacaaagccaagctggggctgtactttaac
ccgtacggcaaggtgctggatctgatcgacgactgcatctcctgtggcgtagatcagctg
atcaacgccgcgggtggcccggtgtggacagaagagggctttgcgaagctgcacgaaaaa
gtgcgcgccgagcttaacgagacggtggtgaacattgcgaaacaggtcgagcagatcctc
accgcggtgttcaatatcaacaaacgcctcaaagggcgggtggatatgaccatggcgctg
gggctgtcggacgtgaaggcccagatggccgggctggtctatcgcgggtttgtcaccggg
aacggctacaagcgtctgggggatacgctgcgctacttgcaggcgattgaaaaacgtctc
gagaagatggccatcgatccgcaccgtgaccgggcgcagatgctgaaggtggaagcggtg
cagcagcgctggcagcagtggctgaataagctgccacctgcccgccgcgatgacgaagat
gtgcaggagatccgctggatgatcgaagagctgcgtgtcagcttcttcgcgcagcagctg
gggacaccatacccgatctccgacaagcgtatcttgcaggcgatggagcagatttcggcg
tag
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