Leclercia adecarboxylata: APT61_18855
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Entry
APT61_18855 CDS
T04232
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lax
Leclercia adecarboxylata
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lax03021
]
APT61_18855
Transcription machinery [BR:
lax03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
APT61_18855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ALZ97958
LinkDB
All DBs
Position
4064982..4067888
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPATGENRLYARNDSPVTRVMFNPGDT
VTSHEGWQLKIEDVKEENGLLAYIGTRLDTEEADVMLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFSLRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRYAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
DADNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDIMVVDEAHHLVWSEDAPSREYMAIE
QLAERVPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFALFVEEQNNYRPVADAVALLL
AGKHLSNEELNTLGELIGEQDIEPLLQAANSDRDGAEAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTANRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWFHEGLDAFEHTCPTGRTIYDNVHSELTGYLAAPENT
DGFDDLIKTCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLISFAM
NLFDIVGINQDDRGENMIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLSRFLPATP
VRLLLDKNGTNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVYTILQQGEPQIEKAAR
ALIDAARSEADEKLSAELSRLEALRAVNPNIRDDELAAIESNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgacacagaaagcgaacttgggttagga
actgtggttgcgctggatgcgcgtatggtgactctccttttccccgccaccggtgaaaac
cgtctgtatgctcgcaatgattcccctgttacccgcgtgatgttcaacccgggcgacacc
gttaccagccatgagggctggcagctgaagattgaagacgtaaaagaagagaatggactg
ctcgcctatatcggcactcgcctcgataccgaagaggccgatgtcatgctgcgcgaagtg
ctgctcgacagcaaactggtatttagcaagccacaggatcgcctgttcgccggtcagatt
gaccgtatggatcgcttctcgctgcgctaccgcgcgcgtaagttccagagcgaacagtac
cgtatgccgtggagcggcctgcgcggccagcgtaccagcctgatcccccatcagttaaac
attgcccatgacgtcggtcgccgctatgcaccgcgcgtcctgctggccgatgaagtgggg
ttaggtaaaaccatcgaagcgggcatgattttgcatcagcagttgctctccggcgcagcc
gagcgcgtgctcattgtggtgccggaaaccctgcaacaccaatggctggtggagatgctg
cgccgctttaacctgcgtttctccctgtttgacgatgagcgctacgccgaagcccagcac
gatgccgataacccgttcgaaaccgaacagctggtgatctgctccctggactttgttcgc
cgtagcaaacagcgcctggagcatctgtgcgacgccgagtgggacatcatggtggtcgac
gaagcccatcacctggtctggagcgaagatgcgccgagccgtgagtacatggcgattgaa
cagctggccgagcgtgtaccgggtgtgttactgctgaccgctaccccggaacagctgggt
ctggagagccactttgcgcgtctgcgtctgctggatccaaaccgcttccatgacttcgca
ctctttgtcgaagagcagaacaattaccgcccggtagccgacgccgttgccctgctgctg
gcgggcaagcacctctccaacgaggagctgaacaccctgggcgagctgattggcgaacag
gatatcgagccgttgctgcaggccgccaacagcgatcgtgacggtgctgaagccgcgcgt
caggagctggtctccatgctgatggatcgccacggcaccagccgcgtcctgttccgtaac
acccgtaatggggtgaaaggcttccctaaacgcgagctgcatactattcgcctgccgctg
ccgacccagtaccagacggcgatcaaggtgtcaggcatcatgggtgcgcgcaaaacggca
gaagagcgtgcccgggacatgctttacccggaacagatttatcaggaatttgaaggcgac
agtggcacctggtggaacttcgatccccgcgttgagtggctgatgggctatctgaccgcc
aaccgctcgcaaaaggtgctggtgatctgcgccaaagcgaccactgcgctccagcttgag
caggttctgcgcgagcgggagggtatccgcgcggctgtgttccatgaaggcatgtcgatt
attgaacgtgaccgtgcggcggcgtggttctccgaagaggacagcggcgcacaggtgctg
ctctgctccgaaatcggctccgaagggcgtaacttccagttcgccagccgtctggtgatg
ttcgatctccccttcaacccggatctgctggagcagcgtatcggccgtctggatcgtatt
ggccaggcacacgacattcagatccacgtcccgtatctggaaaaaaccgcccagtcagta
ctggtgcgctggttccacgaagggctggatgcgtttgaacatacctgcccgaccggccgt
actatttacgacaacgttcacagcgagctgaccgggtatctggcggcaccggaaaacacg
gacggtttcgacgatctgatcaaaacctgccgcgagcagcatgaggccctgaaagcgcag
ctggaacagggccgtgaccgtttgctggagatccactccaacggtggcgaaaaggcccag
gcactggccgagagcatcgaagagcaggatgacgataccagcctaatcagcttcgccatg
aacctgtttgatatcgtcggtatcaaccaggacgatcgcggcgagaacatgattgtgctg
acgccgtccgatcatatgctggtcccggatttcccgggcctgccggaagatggctgcacc
atcacctttgaacgtgatgtggcactctcccgcgaggatgcccagttcatcacctgggag
catccgctgatccgtaacggtctggatctgatcctctctggcgataccggtagcagtacc
atttcgctgctgaagaacaaggcgctgccggtggggacactgctgctggagctgatctac
gtggttgaagcccaggcaccgaaacagctgcagctcagccgcttcctgccagccacgccg
gtgcgtctgctgctggataagaacggcaccaacctggcggcgcaggtggagtttgagagc
tttaaccgtcagctgagtgcggtgaaccgccacaccggcagcaagctggtgaatgcggtg
cagcaggacgtctataccatcctgcagcagggtgagccgcagatcgagaaagcggcgcga
gcattgattgacgcggcacgcagcgaagcggatgaaaaactgtcggcggagctgtcgcgt
ctggaagccctgcgcgcggtcaatccgaacattcgtgacgatgaactggcggcgattgag
agcaatcgtcagcaggtactcgaaagcctgaatcaggcgggatggcgcctggatgcgctg
cgtctcatcgttgtgacgcatcagtaa
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