Lactobacillus amylovorus GRL1118: LAB52_01680
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Entry
LAB52_01680 CDS
T01954
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lay
Lactobacillus amylovorus GRL1118
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_01680
DNA repair and recombination proteins [BR:
lay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LAB52_01680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
SLFN-g3_helicase
RecA
nSTAND3
AAA
AAA_14
AAA_24
AAA_16
GvpD_P-loop
AAA_22
DUF7129
NTPase_1
ABC_tran
NACHT
RUBY_RBDX
ATPase_2
RNA_helicase
NPHP3_N
NB-ARC
AAA_5
CbiA
KdpD
DUF2642
AAA_7
KTI12
DUF7125
AAA_19
HypA
DUF4776
OapC
Motif
Other DBs
NCBI-ProteinID:
AEA31321
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All DBs
Position
323477..324853
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AA seq
458 aa
AA seq
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MARVKTQYKCRSCGYISASYLGRCPNCGAWNQFEKETEEVQKRSTKATASRLIQKTGVNE
PVKLDKIKAEKEERIPTKSEELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLQIMSDLSEK
YKVLYVSGEESANQIKLRADRLGVGQSNMLLYPETDMHDIREQINDVKPDFVVIDSIQTM
NEPSLDSMTGSASQVREVTSELMKIAKMNAITIFVIGHVTKEGAIAGPKIMEHMVDTVLY
FEGDEHHSYRILHSVKNRFGAANEIGMFEMVNEGLKEVTNPSSIFLDQRLPNSTGSAVVV
SLEGTRPLLAEIQALVTPTAFGYAKRTTSGLDYNRAALLLAVLEKRGNLMLQNQDVYLTA
TGGIKLNEPAIDLAIVMAVSSSYTDKEISPTDCFVGEVGLTGEVRRVDKIDARVKEAAKV
GFKRIFVPRHNMYAGLQDYGIEVIPVSSIPQALKLVFD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagtaaaaacacaatataaatgtcgctcctgtggctatatttctgcgagttac
ttgggtagatgccctaattgtggtgcttggaatcagtttgaaaaagagactgaagaagta
caaaagcgttctactaaggctacagctagtcgtttaattcaaaagaccggtgtcaatgaa
ccggttaagttagacaaaattaaggcagaaaaagaagaaagaattcctaccaaatctgaa
gaattaaatcgtgttttaggtggcggtatcgtgccaggatcgcttgtcttaattggcggg
gatcccggaattggtaaatctacattgatgctgcagatcatgagcgatttatctgaaaaa
tataaagtactatatgtttcaggggaagaatcagctaatcagatcaagttaagagccgat
cgacttggcgtagggcaaagcaacatgctgttatatcccgaaactgacatgcatgatatt
cgtgaacagattaatgatgttaaacctgactttgtggtgatcgattccattcaaacgatg
aatgaacctagtttggactcgatgaccggttcagcttcacaggttagggaagtaaccagt
gagctcatgaagatcgctaaaatgaatgcgatcacgatttttgttatcggtcacgtgact
aaagaaggggccattgctggtcctaagattatggaacacatggtggatacggtactttat
tttgagggggatgaacaccactcttaccgtattctgcactctgttaaaaaccgttttggt
gctgctaacgaaattggcatgtttgagatggtcaatgaagggctaaaagaagttactaat
ccatcatctatttttcttgatcaaagattgcctaactcaactggttcagctgtcgttgtt
tcgcttgaaggaacccgtccacttttagctgaaatccaagctttggtaaccccaacggca
tttggctatgcgaagcgaacaacttcaggccttgattacaatcgagcagctcttttactt
gccgttcttgaaaagcgtggtaatttaatgttgcaaaatcaagatgtttatttaactgca
actggcgggattaaactgaatgaaccggcaattgatttagctattgttatggctgtgtca
tctagttacacagataaagaaatttcaccaacggactgctttgtaggtgaagttggttta
accggtgaagttcgccgcgtagacaagatcgatgctagggtaaaagaagccgctaaagtt
ggctttaaacgaatctttgtaccgcggcacaacatgtatgctggtcttcaggattatggc
atcgaagtaattccagtttccagtattccacaagcattaaaattagtttttgattag
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