KEGG   Lactobacillus amylovorus GRL1118: LAB52_03210
Entry
LAB52_03210       CDS       T01954                                 
Name
(GenBank) Pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
lay  Lactobacillus amylovorus GRL1118
Brite
KEGG Orthology (KO) [BR:lay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lay03009]
    LAB52_03210
Enzymes [BR:lay01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     LAB52_03210
Ribosome biogenesis [BR:lay03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LAB52_03210
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AEA31616
LinkDB
Position
628973..629878
AA seq 301 aa
MTSLFKLIVQERDPKKLGSFLLKKGFSHQALKHARYNNGLILVNHKRRYTSFHLKTNDEV
IFVTGEEKKNDFLKPSNNPVEPVLETKNYIILNKPAGVLSIPSRYEDNDAIVNRLMGYFT
RKGAKDLKPHVITRLDRDTSGLVLVGKNAVAHARFSKIGKERFIKKYHAIVHGNFESTEL
TGLIDEPIGKIDSGVKRGVIPDGKSAQTEYKVLKQVPGASLVELRLLTGRTHQIRVHMAY
LGHPLYGDQLYGVKDSFSRQALNCFYLSFPDPVNSEKDKTVEISDPSDMQNLWQKLINKK
F
NT seq 906 nt   +upstreamnt  +downstreamnt
atgactagtttatttaaactaattgtgcaagaaagagacccaaaaaaattgggctctttt
ttgttaaaaaaaggattttcacatcaagcattgaaacatgctcgatacaataatggctta
attttggtcaatcataaaagacgatataccagctttcacttgaaaacgaatgatgaagtg
atttttgtgactggcgaagaaaagaaaaatgattttttaaagccgtctaataatccggta
gagccagttttagaaacgaagaattatattattttgaataaaccagcaggtgtgttgtca
attccatcacgctatgaggataatgatgccatcgttaatcgtttgatgggctattttact
cgcaagggagcaaaagatttaaagccgcacgtaattactaggctagatcgtgatacgtca
ggtttagtgctggtcggtaaaaatgctgtagcccatgcccgttttagtaagattggcaaa
gagcgatttatcaaaaaatatcatgcgattgtgcatggcaactttgaatctactgaatta
actggtttaattgatgaaccaattggcaaaatcgattcaggtgtaaaacgaggggtaatt
ccagatggtaaatctgctcagacagagtacaaggtgcttaaacaagtgccgggagctagt
ctagtggaattgcgcttattaactggtagaacgcatcaaatccgtgttcatatggcctat
ttaggtcatcccctttatggcgatcaattatatggagtaaaggattctttttcccgtcag
gctttaaactgtttttatttaagctttcctgatcctgttaatagcgaaaaagataaaacc
gttgaaatttctgatccaagtgatatgcaaaatctctggcaaaagctaattaataaaaaa
ttctaa

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