Lactobacillus amylovorus GRL1118: LAB52_03470
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Entry
LAB52_03470 CDS
T01954
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lay
Lactobacillus amylovorus GRL1118
Pathway
lay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAB52_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_03470
Enzymes [BR:
lay01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LAB52_03470
DNA repair and recombination proteins [BR:
lay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LAB52_03470
Prokaryotic type
LAB52_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AEA31668
LinkDB
All DBs
Position
694131..694829
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AA seq
232 aa
AA seq
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MAKELIGNDWDQVLDPVFASEKYHELHNFLREEYSTKQIYPDMYHIFTAFKLTPFAKTKV
VILGQDPYHNPGQANGMSFSVMPGTPLPPSLKNIYKELYDDVGAQPVNHGYLKKWADQGV
LLLNAVLTVPYGHANGHQGKGWEDVTDTAIKALSERGKVVFILWGRFAQNKIPLIDQSKN
FIIKSSHPSPFSADRGFFGSRPFSRCNAALVKFGETPIDWQLPKTVSKSDIA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaagaattaattggcaatgattgggatcaagtattagatccagtctttgcaagt
gagaaatatcacgaacttcataactttctaagagaagaatactctactaagcaaatttat
cctgacatgtatcatatattcacagctttcaaattaactccctttgctaaaacaaaggta
gtcattttgggacaagatccataccataatcctggacaggcaaatgggatgagtttttct
gtcatgccaggtacaccacttccgccatcacttaaaaacatctataaagaactttatgat
gatgttggtgcacagccagttaaccatggttatttgaaaaaatgggcagatcaaggcgta
ttgcttttgaatgccgttttgaccgtaccatatggacacgcaaatggccatcaaggtaaa
ggctgggaagatgtcacagatacggcaattaaggcgttaagtgaacgtggcaaggtggtt
ttcatcttatggggcagatttgcgcaaaacaaaatcccattaattgatcaaagtaagaac
tttattataaaatcatctcatccgagtccattttcggctgatcgtggattctttggctca
agaccattttcacgttgtaatgcggcattagttaaatttggtgagacaccgattgattgg
caattgccaaaaactgtaagtaaatcagacatagcataa
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