Lactobacillus amylovorus GRL1118: LAB52_04025
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Entry
LAB52_04025 CDS
T01954
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lay
Lactobacillus amylovorus GRL1118
Pathway
lay00470
D-Amino acid metabolism
lay00550
Peptidoglycan biosynthesis
lay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LAB52_04025 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LAB52_04025 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lay01011
]
LAB52_04025 (murD)
Enzymes [BR:
lay01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LAB52_04025 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lay01011
]
Precursor biosynthesis
Amino acid ligase
LAB52_04025 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AEA31775
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Position
790431..791810
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AA seq
459 aa
AA seq
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MKDIKTYTDKNILVLGLGKSGFAVSELLLKLGAKLTLNDKADLDKNEKAQELKARGVRVI
GGHHPVDLLEKEHFDYLVKNPGIPYENQMVQKAEELNIPIITEPEIALSCSEAPYVCVTG
SNGKTTTVMLTQRILDHHLQKSGHHAYAVGNIGVPISEVVPKATKDDILVVEISSFQLLG
VTDIDPKVAAIVDIYHNVHLDYHKTFENYVNAKLNVTRTQTSDDYFIANYDQKDILAQEK
KVSPAKMQTFSETDHNADYFIGDEYLESQNEKIMKIADIKLPGIHNLQNSLVAIAISKIM
GADNDDIAAVLSTFTGAKHRLQYVTTLDGRKVYNDSKSTNIEAATVAIPAFKEPEVLIAG
GLDRGFTFDDLVPLFKKHVKSIVLYGETKYLLADAARKAGIKDIVIVNTLQEAVPRAYEL
TEPGDVLLFSPACASWDQFRTFEERGDYFVRFVKELKTK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatattaaaacttatactgataagaatattttagttttaggtttaggaaaaagc
ggttttgctgttagtgagttgctcttaaagttgggcgctaagctaactttaaatgacaaa
gctgatcttgataagaatgaaaaagcacaagaattaaaggctagaggcgtccgtgtaatc
ggtggacatcacccagttgaccttcttgaaaaagaacactttgattatttagttaagaac
ccaggtatcccctacgaaaaccaaatggtccaaaaggctgaggaattaaatattcctatt
attactgaacctgaaatcgcattgagctgcagtgaggcgccttatgtttgtgtaacaggt
tcaaacggtaagactactacagtaatgcttactcaaagaattttggatcaccatttgcaa
aaatctggtcaccacgcttatgccgttggtaacattggtgtgccaatttccgaagttgtt
cctaaggctactaaagacgatatcttagtagtggaaatttcaagcttccaacttctaggt
gtaactgacattgatcctaaggttgcagctatcgttgatatttatcacaatgttcacttg
gactaccacaagacctttgaaaattatgtcaacgcaaaattgaacgtaactagaacccaa
actagtgacgattactttatcgctaactatgatcaaaaggacattttggctcaagaaaag
aaagtatctccagctaagatgcaaactttctcagaaactgatcataatgcagattacttt
atcggtgatgaatatcttgaaagccaaaacgaaaagattatgaagattgctgatatcaag
ttgccaggtatccataacttgcaaaacagtttagtagcgatcgctatttctaagattatg
ggtgctgacaatgatgatattgcagcagttttaagcacttttactggtgctaagcatcgt
ttgcaatatgtaacaacacttgatggtcgcaaggtttataatgattctaagtcaactaat
attgaagctgctacggtagccattcctgcatttaaggaaccagaagtattaattgctggt
ggtctagatagaggattcacctttgacgatttggtaccattatttaagaagcacgttaag
tcaatcgttctttatggtgaaactaagtatcttttggctgatgcagctagaaaagctggc
attaaggatatcgtgatcgttaatacccttcaagaagctgttccaagagcttatgaattg
actgaacctggcgacgtattattgttctcaccagcatgtgcttcatgggatcaattcaga
accttcgaagaacgtggcgattactttgttagatttgttaaggaattaaagactaaataa
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