Lactobacillus amylovorus GRL1118: LAB52_05945
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Entry
LAB52_05945 CDS
T01954
Name
(GenBank) ATP-dependent exonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lay
Lactobacillus amylovorus GRL1118
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_05945
Enzymes [BR:
lay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAB52_05945
DNA repair and recombination proteins [BR:
lay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LAB52_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Phage_p2_ORF12
Motif
Other DBs
NCBI-ProteinID:
AEA32126
LinkDB
All DBs
Position
complement(1168084..1171566)
Genome browser
AA seq
1160 aa
AA seq
DB search
MIKILTGRQTDPLQEKILEEAVRNYQQHPEHKTFIIVPNHIKFTTEVRAINKLAISKNQS
ETAVKNLHVLSFSRLAWFFLKDAEQGLPTQLDDAASAMLLTHIVEQEKDKLTIFENSNTG
LINQLYSTILQIYDGNVNLEDIDEDSLDQETKSKVHDLRIIYDAFIKEIAGKFSTKNEVQ
VQLNEILAKNKNLGNTSFYFCDFSHFSLQETLTIKLLMRKAKNVVLAFKTRLGDINPQAE
EGDYDYVIQQTISRFTSFLQERKMEYTVNSFPLSPKPTKREILNSLWTEAISKTDDLNQV
QLVKADSRYAEAYFVARTIYQQVALSNYRYHDFLILAPDLKEYETYLTPILRQNKIPFFN
DLQQEMKYHPLVVLIENLFNLHDLKGNPFTTSSMLAILKTHLLIPSWYKEEAEYIHDVDE
LENFVLAHGINHGLWRKKFSDFVNAEVIRLDKMDEEVAKIDRLRSYLVDKVTNLFEKLAQ
EKDSQKALTIFFDFLTENGIATRLEKWRDDANDAGDLQQAQQPEQLWDLLIQLLSDYLMI
NPEEFNMDEFFNMLINAFKEANFSQIPSTLDAVNLSEIGMVQTSGYKQVFIIGATSGNLP
AIQKMPGFLTTENLAQLQDSFSSDSYLEDNQQLNNLDQNYQFGLSLALAQDRVYVSYPVL
NASNETLNSSIYYQRLSDYGAREFEQHDLPEKMQDLLSFITNADASLGYLAYMNSLAKSS
AITKLLQLTQKVLPQKTDSVLDASQFDNQPEDIGEELATKLYGENLNSSVSQLETFYKNS
YEYFLTYGLRLRRRFENEFDVIQAGNYFHETFDRLVKQLNKRHLDLADLNGTELESMLNS
VREVMKDEGKYAQLMNDPFNQYLFKCLDHTTSKVAHNWRKSLTKTPLRAKYSELSFGVGE
RLKGLSFAVPDLSGNHHVDLRGKMDRVDLANFADKDQVLAQVIDYKSSAKKFDLGMFYNG
IALQMVSYLDVLANNNQFFAGSDQLSLLGAFYQTVTRQLERLNSDKLIDSSMNLRQAATD
SKPKLMYNGIISNDPDILTEAEPLLEGSTKQVSELYTGVKTKAKGGFSLPANRSFSEEEI
ELLLEYDEYLIKEASSQILSGKISLNPYKYGKSQNALTYSDFKDIFFFDAMLRQNQYHEI
SNMKKKDLLAKIKERLGRED
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaattctaacaggaagacaaaccgacccattacaagaaaaaattctggaagaa
gcagtgcggaattatcagcagcatccagaacataaaacttttatcattgttcctaatcat
attaagtttaccacagaagttagggcaattaataaacttgcaatcagtaaaaatcaaagt
gagacggcagttaagaatttgcacgtcctttctttttctcgtcttgcttggttcttctta
aaagatgcggaacaaggcttgcctacacagctagatgatgcggcaagtgcaatgctgctt
acgcatatcgtagaacaagaaaaagataagctaaccatctttgaaaattcaaatactggt
ttaattaatcagttgtacagtactattttacaaatttatgatggcaacgtaaatttagaa
gatatcgatgaagatagtttagatcaagaaactaagagtaaggttcacgatttacggatt
atttacgatgcttttattaaagaaattgcaggtaaattttctaccaaaaatgaagttcaa
gttcagttgaatgaaattttggctaagaataaaaacctaggtaatactagtttttatttc
tgtgatttttcgcatttttcattgcaagaaactttaactattaaattgctgatgcgcaag
gctaaaaatgtggttttggctttcaaaacaaggttaggtgacattaatccgcaggccgaa
gagggcgactacgactatgtaatccagcagacgatcagtcgttttacttcatttttgcaa
gaaagaaaaatggagtatacggtcaacagcttccctctttcaccaaaaccaacaaaacgc
gaaatacttaatagtttatggactgaagcaatttcaaaaactgacgatttaaatcaagta
cagttggtaaaagcagattcacgttatgccgaagcatattttgttgcacgtacgatttat
cagcaggttgctttaagcaattaccgttatcatgattttttgatcttggcaccagattta
aaggaatacgagacttacttaacgccaattttaaggcagaataaaattcctttcttcaat
gacttgcagcaagagatgaagtatcaccctttagttgttttaattgaaaacctgtttaat
ctgcatgatttaaaaggcaatccttttactacttcgagtatgctagcaattttaaaaacg
catttgcttattccgtcttggtataaagaagaagccgaatatattcatgatgtcgatgaa
ttagaaaattttgtcttggctcacggtattaatcacggtttgtggcgtaaaaagttttct
gactttgtgaatgcggaagtcattcgtctggataagatggatgaagaagttgctaagatt
gatcgcttgcgtagttatctggttgataaagtaactaatttatttgaaaaattagcacaa
gagaaagatagtcaaaaggcattaacgatcttttttgactttttaaccgaaaatggaatt
gccactagactagaaaaatggcgtgatgacgctaatgatgctggagacttgcaacaagca
caacagccagagcaattgtgggatttgttgattcaattgcttagtgactatttaatgatt
aatcctgaagaatttaatatggatgaatttttcaatatgttgattaatgcctttaaggag
gctaacttctcgcaaattccatccacgcttgatgcagttaacttatctgaaatcggaatg
gttcagactagtggctataagcaggtcttcattattggtgcaactagcggtaatttgcca
gctattcaaaagatgccaggctttttaaccactgaaaacttagctcaattgcaggatagt
tttagttcagattcatatttggaagataatcaacaattaaataatttggatcaaaactac
caatttggtttatcactggccttagctcaagaccgtgtgtatgtgtcatatcctgtctta
aatgcatcaaatgagacgctaaattcttctatctattatcaacgcttaagcgactatggt
gctcgtgaatttgagcagcatgatttgccagaaaaaatgcaggatctcttgtcatttatt
acaaatgcagatgccagtttaggttatttggcttatatgaactcattagctaagtcgtca
gcgattactaaattgcttcagctgactcaaaaagtattgccacagaagacggattctgtt
ttagatgctagtcaatttgataatcaaccagaggatattggtgaagaactagctactaag
ttatatggtgaaaatctaaactcatcagtttctcaactagaaactttttataaaaattcc
tatgaatatttcttaacttatggtttaagattacgacgccggtttgaaaatgaatttgat
gtaattcaagcgggcaattacttccatgaaacctttgaccgtttagtaaagcaacttaat
aagcgtcaccttgatttggctgatctcaatggtactgagctagaaagtatgcttaattct
gtgagagaagtcatgaaggatgaaggaaaatatgcccagttaatgaatgatccgtttaat
cagtatttgttcaaatgtctggatcatacaacctcgaaagtagctcacaattggcgtaag
tcactaactaaaacgccacttagagctaagtactctgaattaagttttggggtaggagaa
cgtcttaaaggtcttagttttgcagtccctgatttatcaggcaatcaccatgttgattta
cgcggaaaaatggaccgggtagatttggctaactttgccgacaaggatcaagtattagca
caggttattgactacaagtcatcagctaaaaagtttgatttaggtatgttttacaatggc
atcgccttacagatggtttcatatctagatgttttagctaataataatcaattctttgcc
ggaagcgatcaattgtcgttattaggtgcattttatcaaacagttactagacagttagag
agactgaacagcgataagctgatcgatagttctatgaatcttcgtcaagctgcaactgat
agcaagcctaaattgatgtacaacggcatcatcagtaacgacccggatattttaacggaa
gctgaaccgttactagaaggaagcactaagcaggtttcagagctttatactggtgttaaa
actaaagctaaaggtggatttagtttgcctgccaatcgtagtttcagtgaagaagaaatt
gaattgttgctagagtatgatgaatatttgatcaaggaagcatcaagtcagattctgtcc
ggtaagattagtttgaatccgtataaatatggtaagtcacaaaatgctctaacttattca
gacttcaaggatatcttcttctttgatgcgatgcttagacaaaatcaataccatgaaatc
agtaatatgaagaaaaaagatctgttagctaaaatcaaagaaagattaggaagagaggac
taa
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