Lactobacillus amylovorus GRL1118: LAB52_06425
Help
Entry
LAB52_06425 CDS
T01954
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lay
Lactobacillus amylovorus GRL1118
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lay03016
]
LAB52_06425 (truB)
Enzymes [BR:
lay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LAB52_06425 (truB)
Transfer RNA biogenesis [BR:
lay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LAB52_06425 (truB)
Prokaryotic type
LAB52_06425 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEA32214
LinkDB
All DBs
Position
complement(1253092..1253985)
Genome browser
AA seq
297 aa
AA seq
DB search
MLNGILVIDKDKDMTSADVVYHLRRALHIRKIGHAGTLDPEVTGVLPIAIGQATKLIELM
HTRPKKYEGQGLLGYATDSYDATGTVLKEEKLDHPFTTEEIQAGMDSFKGEIEQVPPIYS
AVKVNGKHLYEYAREGIAVERPKRTVDIYDYLLIDKPVFDEEKGQESFGFEIECSKGTYV
RSLVNDLGEKLGKPAVMTELRRTASSGFDISQAVKLSEIEANPEKADELIQPIDAFFTNY
ETIDLSDDQWKKVQNGAWIKLETDAKKVALRYNKKVKAIYENKGRLYCPSLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggaattttagtgattgataaagacaaggatatgacaagcgcagatgttgtt
taccatttgcgtcgtgcgttgcatattagaaaaattggtcatgctggtacattggatcct
gaagtaacgggagttttgcctattgcaattggtcaagctaccaaattaatcgaattgatg
cacacacgtcctaagaagtatgaaggccaaggcttgttgggttacgctactgattcatat
gatgcaacgggtacggttttaaaggaagaaaagcttgatcatccttttactactgaagag
attcaggctggaatggattcttttaagggcgaaattgagcaggttccaccgatttattca
gcggttaaagtaaatggtaagcacttatatgaatatgcccgtgaaggtattgctgttgag
cgtcctaagcgaacagttgatatctatgactatcttttaatagataaacctgtttttgac
gaagaaaaaggtcaagaaagttttggcttcgaaattgaatgcagtaaaggaacctacgtt
agatcattagttaatgatttaggagaaaaactaggtaagccagccgttatgaccgaatta
agaagaactgctagttctggctttgatatctcacaagcagtaaaattaagtgagattgag
gcaaatccggagaaagctgatgagttgattcaaccaattgatgcctttttcaccaattat
gaaactattgatttatcagatgatcaatggaagaaagtacaaaatggtgcttggattaag
ttagaaacagatgccaaaaaggtagctttaaggtacaataaaaaagttaaggcaatttat
gagaataaggggagactctattgcccaagtctaatgttgcttcaaaatgaataa
DBGET
integrated database retrieval system
