Lactobacillus amylovorus GRL1118: LAB52_07810
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Entry
LAB52_07810 CDS
T01954
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lay
Lactobacillus amylovorus GRL1118
Pathway
lay03030
DNA replication
lay03410
Base excision repair
lay03420
Nucleotide excision repair
lay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAB52_07810
03410 Base excision repair
LAB52_07810
03420 Nucleotide excision repair
LAB52_07810
03440 Homologous recombination
LAB52_07810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lay03032
]
LAB52_07810
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_07810
Enzymes [BR:
lay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAB52_07810
DNA replication proteins [BR:
lay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LAB52_07810
DNA repair and recombination proteins [BR:
lay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LAB52_07810
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAB52_07810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Polysacc_deac_2
DUF61
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEA32481
LinkDB
All DBs
Position
complement(1521117..1523777)
Genome browser
AA seq
886 aa
AA seq
DB search
MADKKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDVDPTHVL
VAFDAGKVTFRTKMYGEYKGGRAKTPEELLEQMPYIQEMLHDLGIKTYELKNYEADDIIG
TFAAKGEKTGFTTTIVTGDRDLTQLASDKTTVEVTKSGVSQLEAYTPEHMKEVNGVTPTE
FIDMKALMGDSSDNYPGVTKVGPKTASRLIQKYGSVEGIYDHIDEMKKSKLKENLINDKD
KAFLAKKLATIDRDSPVTLDIDDIKRQPVDYEKLRQFYEKMNFRKFLADLNASGAGQDST
EVEKVEYIVLNDNVKDVKATEDDTIEFYLEMLGANYHLAPFVGFSLKINDKIYVSRDVEL
LEEDNIKHILEDEKIKKNVFDLKRTMVAAHRLGIHTHGLDYDMLLASYLINNENNSNDLG
EIAHLYGDYSVKTDLEVYGKGKSEHIPDDDDELFNHLASKVNAIEKLKRELLKKLKEHEQ
DALFDTIEIPTACVLARMEMNGMKVEASTLIQLQNEFAVKLKELEDKIYGQAGEKFNLNS
PKQLGHILFEKLGLPVIKKTKTGYSTSVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVKG
LLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSEPDGYIFS
CDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMKIFHLDSPDQVTPLMRRHAKAVNF
GIVYGISDYGLSKNLGISRKRAQEFIDNYFEQYPQIKDYMDKAVQEARDKGYAETIMHRR
RYLPDIHAKKYTVRAFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVVQVHD
ELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWGHNWYDAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaaattacttctaatcgatggtaactctgtagctttcagagccttttac
gctctttatcgtcaactagaatctttcaagagtccggacggcctgcacactaatgccatt
tacgcttttaagaacatgctcgatgtccttttaaaagacgttgatccaacccacgtattg
gtagcttttgatgcaggaaaagtcacttttagaacaaaaatgtatggggaatataaaggt
ggacgtgctaaaactccagaagagttgctcgaacaaatgccttatattcaagaaatgctt
catgacttaggtattaaaacttatgaattgaagaattatgaagcagatgacatcattggt
acttttgctgcgaagggtgaaaagaccgggttcacaaccacgatcgtaactggtgaccgc
gacttgacccaacttgcgtccgacaagacgactgtcgaagtaactaaatctggtgtttct
caacttgaagcttatacaccagaacatatgaaggaagttaatggggtaactccaaccgaa
ttcatcgacatgaaggctttgatgggtgatagttcagataattatccaggtgttacaaaa
gttggccctaaaactgcatcacgtttgattcaaaaatacggttccgttgaagggatttac
gatcatatcgacgaaatgaagaagtccaagttaaaggaaaatttgatcaacgataaagac
aaggcctttttagctaagaaacttgccacgattgaccgtgattcaccggtaactctagat
atcgatgatataaaacgtcagccagttgattatgaaaagctgcgtcaattctatgaaaag
atgaacttccgtaagttcttagctgacctaaatgcttcaggtgctggtcaagatagtact
gaagttgaaaaagtagaatacatcgttttaaacgacaacgttaaggatgttaaggctact
gaagatgacaccattgagttttacttagaaatgctcggtgctaactatcacttagctcct
tttgttggcttcagcttgaagattaacgacaagatctacgtttcaagagacgttgaattg
cttgaagaagataatatcaagcacatcttagaagacgaaaagattaagaagaatgtcttt
gacctgaagagaacaatggttgctgcacatcgtttgggcattcacactcacggtcttgat
tacgacatgcttttggcatcttacttgattaataatgaaaataactccaacgatcttggt
gaaattgcccatctttatggggattattccgttaagaccgaccttgaagtctacggcaaa
ggtaagagtgaacacatccctgatgacgatgatgaattattcaaccacttagcttccaag
gtcaacgccattgaaaaacttaagcgggagcttcttaaaaagcttaaagaacacgaacag
gatgctttgtttgacacaatcgaaatcccaactgcgtgcgttttagccagaatggaaatg
aacgggatgaaggttgaagccagcaccttgattcaactgcaaaatgaatttgccgttaaa
ttgaaggaactcgaagacaagatttatggccaagccggtgaaaagttcaacttgaactca
ccaaagcaattaggtcacattttgtttgaaaagcttggtttgccagtcatcaagaagacc
aagactggttattcaacttcagttgaagtacttgatcaattgaagacgcaaagcccaatc
gttagcgaaattttggactatcgtcaaattgccaagattcaatctacctatgtaaagggt
ctgcttgacgtcattcaaccagatggccgcgtgcacacacgttacttgcagactttgact
gcaactggtcgactttctagtgtggatcctaacttgcaaaatatccctacccgtaccgaa
gaaggaaagcaaatcagaaaagctttcgtgccaagtgaaccagacggctacattttctct
tgcgactattcacaagttgaacttcgtgttttagctcacgtttctggcgatcaaaacatg
caagaggccttcaagaccggatacgatattcactcacacaccgcgatgaagattttccac
ttggattcaccagatcaagtaacgccactgatgcgtcgccacgctaaagccgttaacttc
ggtattgtttacggtatttctgattacggtttgtccaagaacttaggtatttctagaaaa
cgtgcccaagaatttatcgacaactacttcgaacaatatcctcaaatcaaggattacatg
gataaggctgtgcaagaagcgcgtgacaaaggctatgccgaaacaattatgcaccgtcgc
agatacttgccagatattcacgctaagaagtacaccgtgcgtgcctttgctgaaagaacc
gccatcaactcaccaatccaaggttcagctgccgatatcatcaagattgccatgattaac
atgcaaaagaagcttgatgaattgcacctcaagaccaagatggtggttcaggtgcacgac
gaattgatttttgacgtaccaaaagatgaacttgaaacaatcaagaagattgtgccagaa
gtaatgcaatcagcagttaagcttgatgtgccactaattgctgattctggttggggccac
aattggtacgatgcaaagtag
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