Lactobacillus amylovorus GRL1118: LAB52_07965
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Entry
LAB52_07965 CDS
T01954
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lay
Lactobacillus amylovorus GRL1118
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lay03019
]
LAB52_07965
Messenger RNA biogenesis [BR:
lay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LAB52_07965
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
MIB_HERC2
Motif
Other DBs
NCBI-ProteinID:
AEA32512
LinkDB
All DBs
Position
complement(1554130..1555107)
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AA seq
325 aa
AA seq
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MLKRLLDYNDGEEMDIVVLIKNSQLRRNKKNKLFLAMQFGDGSGEIRGNFWDATNQDAAT
FSTGTIVELNGKREEYQGRPQIRIYSLRVVGPQEGYELDQFVKSAPEPINDMHVEINQFV
DQIQNKTWKTIVQYLLKKWGRRFFDYPAGKSNHHAVRGGLAFHTLSMLKDAKGLADNYEQ
INRSLLYAGCILHDMGKVLELTGPAATQYTTEGNLVGHLVLIDEQIMLAAQDLKIDLESE
DLLLLRHMVLSHHGRFEYGSPKLPALLEAEILHRIDDMDAMVYAVTNALQHTGKGTFTEP
LLSQDGRRYYRPKYDPALDHTKHLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacgactcttagattataatgacggcgaagaaatggatatcgtcgttttgatt
aagaattcgcaattgcgacggaataagaaaaataagctctttttagcaatgcaatttggc
gatggatcaggcgagattcggggcaacttttgggatgcaactaatcaagatgcggctacc
tttagtacaggtacgattgtagaattgaacggtaaaagagaagaataccaaggccgtcct
caaattcgcatttatagtttaagggtggttggaccacaagaaggctatgagttagatcaa
ttcgttaagtcagctccagaaccgattaatgatatgcatgtcgaaattaatcaatttgtt
gatcagattcaaaataaaacttggaagacgattgtccaatatttgttaaaaaagtggggt
agacgcttctttgattatcccgcaggaaagagtaaccaccatgcagtgcgcggtggactt
gcttttcatactttgtcgatgcttaaggatgcgaaaggcttagctgataattatgaacag
atcaaccgttcactgctttatgctggatgcattttgcacgatatgggcaaagtgcttgaa
ctaacaggcccagctgcaacgcaatacactaccgaaggtaatttagttggtcacttggta
cttatcgatgaacaaattatgctagctgcccaagaccttaagattgaccttgaatcagag
gacttgcttttacttagacacatggttttgtcccaccatggccgctttgaatatggttca
cctaagttgccagctcttctggaagcagaaattttgcaccgcatcgatgatatggatgcc
atggtttatgcagtcacgaatgctttgcagcatactggtaaaggaacgtttactgagcca
ctgcttagtcaagatggcagaagatattatcgtccaaaatatgatccagctttagatcat
accaagcatttggaataa
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